Domain ID e3vi4D3

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  • A: few secondary structure elements
  • X: Trefoil/Plexin domain-like
  • H: Trefoil/Plexin domain-like
  • T: Trefoil/Plexin domain-like
  • F: PSI_integrin
UID: 001139055
Type: Automatic domain
Parent: e1tyeB2
Range: D:5-63
PDB: 3vi4
PDB Description: Integrin beta-1
UniProt: P05556
Hsap BLAST neighbor: P05556
Species: Homo sapiens

Structure of domain e3vi4D3

Domains in the same chain:

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e3vi4D3 D:5-63 Trefoil/Plexin domain-like Trefoil/Plexin domain-like Trefoil/Plexin domain-like
e3vi4D1 D:64-117,D:362-445 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3vi4D2 D:118-361 HAD domain-like HAD domain-related vWA-like

Domains in the same PDB:

e3vi4A2 A:1-450 beta-propeller-like beta-propeller 7-bladed
e3vi4A1 A:450-601 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3vi4B3 B:6-63 Trefoil/Plexin domain-like Trefoil/Plexin domain-like Trefoil/Plexin domain-like
e3vi4B1 B:64-117,B:362-445 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3vi4B2 B:118-361 HAD domain-like HAD domain-related vWA-like
e3vi4C2 C:1-450 beta-propeller-like beta-propeller 7-bladed
e3vi4C1 C:450-601 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3vi4D3 D:5-63 Trefoil/Plexin domain-like Trefoil/Plexin domain-like Trefoil/Plexin domain-like
e3vi4D1 D:64-117,D:362-445 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3vi4D2 D:118-361 HAD domain-like HAD domain-related vWA-like
e3vi4E1 E:1-112 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3vi4E2 E:113-219 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3vi4F1 F:1-118 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3vi4F2 F:119-218 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3vi4H1 H:1-118 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3vi4H2 H:119-218 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3vi4L1 L:1-112 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3vi4L2 L:113-219 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like

Structural contacts of domain e3vi4D3 of H-group "Trefoil/Plexin domain-like":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e3vi4B1 D:x,y,z->B:X-1,Y,Z Immunoglobulin-related Interaction Interface Pymol