Domain ID e3vkhB6

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  • A: a/b three-layered sandwiches
  • X: P-loop domains-like
  • H: P-loop domains-related
  • T: P-loop containing nucleoside triphosphate hydrolases
  • F: AAA_5
UID: 001765864
Type: Automatic domain
Parent: e3vkhA3
Range: B:2233-2413
Ligands: ADP
PDB: 3vkh
PDB Description: DYNEIN HEAVY CHAIN, CYTOPLASMIC
UniProt: P34036
Hsap BLAST neighbor: Q14204
Species: Dictyostelium discoideum

Structure of domain e3vkhB6

Domains in the same chain:

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e3vkhB1 B:1475-1938 Linker domain of cytoplasmic dynein heavy chain Linker domain of cytoplasmic dynein heavy chain Linker domain of cytoplasmic dynein heavy chain
e3vkhB8 B:1939-2106 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e3vkhB13 B:2107-2232 Histone-like Histone-related AAA+ ATPase lid domain
e3vkhB6 B:2233-2413 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e3vkhB9 B:2414-2443,B:2490-2634 Histone-like Histone-related AAA+ ATPase lid domain
e3vkhB5 B:2635-2821 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e3vkhB10 B:2822-2951 Histone-like Histone-related AAA+ ATPase lid domain
e3vkhB4 B:2952-3178 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e3vkhB14 B:3179-3358 Histone-like Histone-related AAA+ ATPase lid domain
e3vkhB15 B:3537-3640 Histone-like Histone-related AAA+ ATPase lid domain
e3vkhB11 B:3640-3736,B:3758-3791 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e3vkhB2 B:3792-4117 Histone-like Histone-related AAA+ ATPase lid domain
e3vkhB12 B:4118-4244 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e3vkhB7 B:4245-4414 Histone-like Histone-related AAA+ ATPase lid domain
e3vkhB3 B:4415-4465,B:4492-4729 C-terminal domain of cytoplasmic dynein heavy chain C-terminal domain of cytoplasmic dynein heavy chain C-terminal domain of cytoplasmic dynein heavy chain

Domains in the same PDB:

e3vkhA13 A:1512-1938 Linker domain of cytoplasmic dynein heavy chain Linker domain of cytoplasmic dynein heavy chain Linker domain of cytoplasmic dynein heavy chain
e3vkhA1 A:1939-2106 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e3vkhA2 A:2107-2232 Histone-like Histone-related AAA+ ATPase lid domain
e3vkhA3 A:2233-2413 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e3vkhA4 A:2414-2634 Histone-like Histone-related AAA+ ATPase lid domain
e3vkhA5 A:2635-2821 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e3vkhA6 A:2822-2951 Histone-like Histone-related AAA+ ATPase lid domain
e3vkhA7 A:2952-3178 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e3vkhA8 A:3179-3265,A:3600-3639 Histone-like Histone-related AAA+ ATPase lid domain
e3vkhA15 A:3371-3491 Microtubule-Binding Domain of Flagellar Dynein Microtubule-Binding Domain of Flagellar Dynein Microtubule-Binding Domain of Flagellar Dynein
e3vkhA9 A:3640-3791 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e3vkhA10 A:3792-4117 Histone-like Histone-related AAA+ ATPase lid domain
e3vkhA11 A:4118-4244 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e3vkhA12 A:4245-4414 Histone-like Histone-related AAA+ ATPase lid domain
e3vkhA16 A:4415-4730 C-terminal domain of cytoplasmic dynein heavy chain C-terminal domain of cytoplasmic dynein heavy chain C-terminal domain of cytoplasmic dynein heavy chain
e3vkhB1 B:1475-1938 Linker domain of cytoplasmic dynein heavy chain Linker domain of cytoplasmic dynein heavy chain Linker domain of cytoplasmic dynein heavy chain
e3vkhB8 B:1939-2106 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e3vkhB13 B:2107-2232 Histone-like Histone-related AAA+ ATPase lid domain
e3vkhB6 B:2233-2413 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e3vkhB9 B:2414-2443,B:2490-2634 Histone-like Histone-related AAA+ ATPase lid domain
e3vkhB5 B:2635-2821 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e3vkhB10 B:2822-2951 Histone-like Histone-related AAA+ ATPase lid domain
e3vkhB4 B:2952-3178 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e3vkhB14 B:3179-3358 Histone-like Histone-related AAA+ ATPase lid domain
e3vkhB15 B:3537-3640 Histone-like Histone-related AAA+ ATPase lid domain
e3vkhB11 B:3640-3736,B:3758-3791 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e3vkhB2 B:3792-4117 Histone-like Histone-related AAA+ ATPase lid domain
e3vkhB12 B:4118-4244 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e3vkhB7 B:4245-4414 Histone-like Histone-related AAA+ ATPase lid domain
e3vkhB3 B:4415-4465,B:4492-4729 C-terminal domain of cytoplasmic dynein heavy chain C-terminal domain of cytoplasmic dynein heavy chain C-terminal domain of cytoplasmic dynein heavy chain

Structural contacts of domain e3vkhB6 of H-group "P-loop domains-related":

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The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e3vkhA10 B:-X+3/2,-Y+1,Z-1/2->A:x,y,z Histone-related Interaction Interface Pymol