Domain ID e3vm6C2

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  • A: a/b three-layered sandwiches
  • X: Rossmann-like
  • H: Rossmann-related
  • T: NagB/RpiA/CoA transferase-like
  • F: IF-2B
UID: 001189918
Type: Automatic domain
Parent: e1t5oA1
Range: C:111-322
Ligands: CL MG PEG RI2
PDB: 3vm6
PDB Description: TRANSLATION INITIATION FACTOR EIF-2B, DELTA SUBUNIT
UniProt: Q5JFM9
Hsap BLAST neighbor: Q9UI10
Species:

Structure of domain e3vm6C2

Structural contacts of domain e3vm6C2 of H-group "Rossmann-related":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e3vm6B2 C:x,y,z->B:Y,X,-Z Rossmann-related Interaction Interface Pymol
e3vm6B2 C:x,y,z->B:X,Y,Z Rossmann-related Interaction Interface Pymol
e3vm6A2 C:x,y,z->A:X,Y,Z Rossmann-related Interaction Interface Pymol
e3vm6C2 C:x,y,z->C:Y,X,-Z Rossmann-related Interaction Interface Pymol
e3vm6C2 C:Y,X,-Z->C:x,y,z Rossmann-related Interaction Interface Pymol
e3vm6B3 C:X-1/2,-Y+1/2,-Z+3/4->B:x,y,z Translation initiation factor eIF-2B delta subunit N-terminal helical domain Interaction Interface Pymol
e3vm6C3 C:-Y+1/2,X-1/2,Z+1/4->C:x,y,z Translation initiation factor eIF-2B delta subunit N-terminal helical domain Interaction Interface Pymol
e3vm6B2 C:x,y,z->B:-X+1/2,Y-1/2,-Z+1/4 Rossmann-related Interaction Interface Pymol