| UID: | 000987495 |
|---|---|
| Type: | Automatic domain |
| Parent: | e3ir2A1 |
| Range: | B:1-187 |
| Ligands: | ZN |
| PDB: | 3vm8 |
| PDB Description: | PROBABLE DNA DC->DU-EDITING ENZYME APOBEC-3C |
| UniProt: | Q9NRW3 |
| Hsap BLAST neighbor: | Q9NRW3 |
| Species: | Homo sapiens |
Structure of domain e3vm8B1
Domains in the same chain:
| e3vm8B1 | B:1-187 | Cytidine deaminase-like | Cytidine deaminase-like | Cytidine deaminase-like |
Domains in the same PDB:
| e3vm8A1 | A:4-190 | Cytidine deaminase-like | Cytidine deaminase-like | Cytidine deaminase-like |
| e3vm8B1 | B:1-187 | Cytidine deaminase-like | Cytidine deaminase-like | Cytidine deaminase-like |
Structural contacts of domain e3vm8B1 of H-group "Cytidine deaminase-like":
The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.
| Domain ID | Symmetry operator | H-group | Visualization |
|---|---|---|---|
| e3vm8A1 | B:x,y,z->A:X,Y,Z | Cytidine deaminase-like | Interaction Interface Pymol |
| e3vm8A1 | B:X-Y,X,Z+1/6->A:x,y,z | Cytidine deaminase-like | Interaction Interface Pymol |
| e3vm8A1 | B:x,y,z->A:-X,-Y+1,Z-1/2 | Cytidine deaminase-like | Interaction Interface Pymol |
| e3vm8A1 | B:x,y,z->A:-Y,X-Y+1,Z-2/3 | Cytidine deaminase-like | Interaction Interface Pymol |
| e3vm8A1 | B:-Y,X-Y+1,Z+1/3->A:x,y,z | Cytidine deaminase-like | Interaction Interface Pymol |
| e3vm8B1 | B:x,y,z->B:X-Y,X,Z+1/6 | Cytidine deaminase-like | Interaction Interface Pymol |
| e3vm8B1 | B:X-Y,X,Z+1/6->B:x,y,z | Cytidine deaminase-like | Interaction Interface Pymol |
| e3vm8A1 | B:x,y,z->A:X,Y,Z-1 | Cytidine deaminase-like | Interaction Interface Pymol |
| e3vm8B1 | B:x,y,z->B:-X,-Y+1,Z-1/2 | Cytidine deaminase-like | Interaction Interface Pymol |
| e3vm8B1 | B:-X,-Y+1,Z-1/2->B:x,y,z | Cytidine deaminase-like | Interaction Interface Pymol |
