ECOD: domain e3vmmA4

Domain ID e3vmmA4

A: a+b complex topology
X: Protein kinase/SAICAR synthase/ATP-grasp
H: Protein kinase/SAICAR synthase/ATP-grasp
T: ATP-grasp
F: ATP-grasp_4

UID:	001164578
Type:	Automatic and representative domain
Parent:	e2pn1A2
Range:	A:137-472
Ligands:	ADP MG P0D
PDB:	3vmm
PDB Description:	Alanine-anticapsin ligase BacD
UniProt:	P39641
Hsap BLAST neighbor:	A5YM72
Species:	Bacillus subtilis

Domains in the same chain:

Download Pymol

e3vmmA2	A:2-136	Rossmann-like	Rossmann-related	PreATP-grasp domain
e3vmmA4	A:137-472	Protein kinase/SAICAR synthase/ATP-grasp	Protein kinase/SAICAR synthase/ATP-grasp	ATP-grasp

Domains in the same PDB:

e3vmmA2	A:2-136	Rossmann-like	Rossmann-related	PreATP-grasp domain
e3vmmA4	A:137-472	Protein kinase/SAICAR synthase/ATP-grasp	Protein kinase/SAICAR synthase/ATP-grasp	ATP-grasp

Structural contacts of domain e3vmmA4 of H-group "Protein kinase/SAICAR synthase/ATP-grasp":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e3vmmA4	A:x,y,z->A:Y,X,-Z-1/3	Protein kinase/SAICAR synthase/ATP-grasp	Interaction Interface Pymol
e3vmmA4	A:Y,X,-Z-1/3->A:x,y,z	Protein kinase/SAICAR synthase/ATP-grasp	Interaction Interface Pymol
e3vmmA4	A:x,y,z->A:-Y-1,-X-1,-Z+1/6	Protein kinase/SAICAR synthase/ATP-grasp	Interaction Interface Pymol
e3vmmA4	A:-Y-1,-X-1,-Z+1/6->A:x,y,z	Protein kinase/SAICAR synthase/ATP-grasp	Interaction Interface Pymol
e3vmmA4	A:x,y,z->A:-X+Y,Y,-Z-1/2	Protein kinase/SAICAR synthase/ATP-grasp	Interaction Interface Pymol
e3vmmA4	A:-X+Y,Y,-Z-1/2->A:x,y,z	Protein kinase/SAICAR synthase/ATP-grasp	Interaction Interface Pymol
e3vmmA2	A:X-Y,X,Z-1/6->A:x,y,z	Rossmann-related	Interaction Interface Pymol