Domain ID e3vnmD1

Download files:
  • A: a/b barrels
  • X: TIM beta/alpha-barrel
  • H: TIM barrels
  • T: TIM barrels
  • F: AP_endonuc_2
UID: 000971088
Type: Automatic domain
Parent: e1qtwA1
Range: D:1-288
Ligands: MN SDD
PDB: 3vnm
PDB Description: XYLOSE ISOMERASE DOMAIN PROTEIN TIM BARREL
UniProt: B8I944
Species:

Structure of domain e3vnmD1

Structural contacts of domain e3vnmD1 of H-group "TIM barrels":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e3vnmA1 D:x,y,z->A:X,Y,Z TIM barrels Interaction Interface Pymol
e3vnmC1 D:x,y,z->C:X,Y,Z TIM barrels Interaction Interface Pymol
e3vnmB1 D:x,y,z->B:X,Y,Z-1 TIM barrels Interaction Interface Pymol
e3vnmB1 D:x,y,z->B:X,Y,Z TIM barrels Interaction Interface Pymol
e3vnmA1 D:-X,Y-1/2,-Z->A:x,y,z TIM barrels Interaction Interface Pymol
e3vnmC1 D:X-1,Y,Z->C:x,y,z TIM barrels Interaction Interface Pymol