ECOD: domain e3vpbF1

Domain ID e3vpbF1

A: few secondary structure elements
X: Rubredoxin-like
H: Rubredoxin-related
T: Rubredoxin-related
F: LysW-like_globular

UID:	000991102
Type:	Automatic domain
Parent:	e3wwlA1
Range:	F:1-56
Ligands:	GLU SO4 ZN
PDB:	3vpb
PDB Description:	ALPHA-AMINOADIPATE CARRIER PROTEIN LYSW
UniProt:	Q976J8
Species:

Domains in the same chain:

Download Pymol

e3vpbF1	F:1-56	Rubredoxin-like	Rubredoxin-related	Rubredoxin-related

Domains in the same PDB:

e3vpbA2	A:1-86	Rossmann-like	Rossmann-related	PreATP-grasp domain
e3vpbA1	A:87-281	Protein kinase/SAICAR synthase/ATP-grasp	Protein kinase/SAICAR synthase/ATP-grasp	ATP-grasp
e3vpbB2	B:1-86	Rossmann-like	Rossmann-related	PreATP-grasp domain
e3vpbB1	B:87-282	Protein kinase/SAICAR synthase/ATP-grasp	Protein kinase/SAICAR synthase/ATP-grasp	ATP-grasp
e3vpbC2	C:1-86	Rossmann-like	Rossmann-related	PreATP-grasp domain
e3vpbC1	C:87-281	Protein kinase/SAICAR synthase/ATP-grasp	Protein kinase/SAICAR synthase/ATP-grasp	ATP-grasp
e3vpbD2	D:1-86	Rossmann-like	Rossmann-related	PreATP-grasp domain
e3vpbD1	D:87-281	Protein kinase/SAICAR synthase/ATP-grasp	Protein kinase/SAICAR synthase/ATP-grasp	ATP-grasp
e3vpbE1	E:1-56	Rubredoxin-like	Rubredoxin-related	Rubredoxin-related
e3vpbF1	F:1-56	Rubredoxin-like	Rubredoxin-related	Rubredoxin-related

Structural contacts of domain e3vpbF1 of H-group "Rubredoxin-related":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e3vpbB1	F:x,y,z->B:X,Y,Z	Protein kinase/SAICAR synthase/ATP-grasp	Interaction Interface Pymol
e3vpbB2	F:x,y,z->B:X,Y,Z	Rossmann-related	Interaction Interface Pymol
e3vpbD1	F:-X,Y-1/2,-Z->D:x,y,z	Protein kinase/SAICAR synthase/ATP-grasp	Interaction Interface Pymol
e3vpbC2	F:x,y,z->C:X,Y,Z	Rossmann-related	Interaction Interface Pymol
e3vpbC2	F:x,y,z->A:X,Y,Z	Rossmann-related	Interaction Interface Pymol