ECOD: domain e3vqxB2

Domain ID e3vqxB2

A: a+b three layers
X: Class II aaRS and biotin synthetases
H: Class II aaRS and biotin synthetases
T: Class II aaRS and biotin synthetases
F: tRNA-synt_2d

UID:	001306120
Type:	Automatic domain
Parent:	e1jjcA1
Range:	B:188-454
Ligands:	AMP PO4
PDB:	3vqx
PDB Description:	PYRROLYSINE--TRNA LIGASE
Species:	Methanosarcina mazei

Domains in the same chain:

Download Pymol

e3vqxB2	B:188-454	Class II aaRS and biotin synthetases	Class II aaRS and biotin synthetases	Class II aaRS and biotin synthetases

Domains in the same PDB:

e3vqxA1	A:191-454	Class II aaRS and biotin synthetases	Class II aaRS and biotin synthetases	Class II aaRS and biotin synthetases
e3vqxB2	B:188-454	Class II aaRS and biotin synthetases	Class II aaRS and biotin synthetases	Class II aaRS and biotin synthetases
e3vqxC1	C:190-433	Class II aaRS and biotin synthetases	Class II aaRS and biotin synthetases	Class II aaRS and biotin synthetases
e3vqxD1	D:191-454	Class II aaRS and biotin synthetases	Class II aaRS and biotin synthetases	Class II aaRS and biotin synthetases

Structural contacts of domain e3vqxB2 of H-group "Class II aaRS and biotin synthetases":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e3vqxA1	B:x,y,z->A:X,Y,Z	Class II aaRS and biotin synthetases	Interaction Interface Pymol
e3vqxC1	B:X,Y-1,Z->C:x,y,z	Class II aaRS and biotin synthetases	Interaction Interface Pymol
e3vqxD1	B:x,y,z->D:X-1,Y,Z	Class II aaRS and biotin synthetases	Interaction Interface Pymol
e3vqxD1	B:X,Y-1,Z-1->D:x,y,z	Class II aaRS and biotin synthetases	Interaction Interface Pymol
e3vqxA1	B:X-1,Y,Z->A:x,y,z	Class II aaRS and biotin synthetases	Interaction Interface Pymol
e3vqxB2	B:x,y,z->B:X-1,Y-1,Z	Class II aaRS and biotin synthetases	Interaction Interface Pymol
e3vqxB2	B:X-1,Y-1,Z->B:x,y,z	Class II aaRS and biotin synthetases	Interaction Interface Pymol
e3vqxD1	B:x,y,z->D:X-1,Y+1,Z	Class II aaRS and biotin synthetases	Interaction Interface Pymol
e3vqxC1	B:x,y,z->C:X-1,Y,Z	Class II aaRS and biotin synthetases	Interaction Interface Pymol
e3vqxD1	B:x,y,z->D:X-1,Y,Z+1	Class II aaRS and biotin synthetases	Interaction Interface Pymol
e3vqxA1	B:x,y,z->A:X,Y-1,Z	Class II aaRS and biotin synthetases	Interaction Interface Pymol