ECOD: domain e3vr1B16

Domain ID e3vr1B16

A: a/b three-layered sandwiches
X: P-loop domains-like
H: P-loop domains-related
T: P-loop containing nucleoside triphosphate hydrolases
F: GTP_EFTU

UID:	001212788
Type:	Automatic domain
Parent:	e2c78A3
Range:	B:1-278
Ligands:	G4P
PDB:	3vr1
PDB Description:	PEPTIDE CHAIN RELEASE FACTOR 3
UniProt:	B8DIL5
Hsap BLAST neighbor:	Q96RP9
Species:

Domain
In chain context
In PDB context

Structure of domain e3vr1B16

Domains in the same chain:

Download Pymol

e3vr1B16	B:1-278	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e3vr1B18	B:279-389	cradle loop barrel	RIFT-related	Alanine racemase-C
e3vr1B17	B:390-529	Alpha-beta plaits	EF-G C-terminal domain-like	EF-G C-terminal domain-like

Domains in the same PDB:

e3vr1A10	A:1-278	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e3vr1A12	A:279-389	cradle loop barrel	RIFT-related	Alanine racemase-C
e3vr1A11	A:390-529	Alpha-beta plaits	EF-G C-terminal domain-like	EF-G C-terminal domain-like
e3vr1B16	B:1-278	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e3vr1B18	B:279-389	cradle loop barrel	RIFT-related	Alanine racemase-C
e3vr1B17	B:390-529	Alpha-beta plaits	EF-G C-terminal domain-like	EF-G C-terminal domain-like
e3vr1C16	C:1-278	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e3vr1C18	C:279-389	cradle loop barrel	RIFT-related	Alanine racemase-C
e3vr1C17	C:390-529	Alpha-beta plaits	EF-G C-terminal domain-like	EF-G C-terminal domain-like
e3vr1D16	D:1-278	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e3vr1D18	D:279-389	cradle loop barrel	RIFT-related	Alanine racemase-C
e3vr1D17	D:390-529	Alpha-beta plaits	EF-G C-terminal domain-like	EF-G C-terminal domain-like

Structural contacts of domain e3vr1B16 of H-group "P-loop domains-related":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e3vr1A10	B:x,y,z->A:X,Y,Z	P-loop domains-related	Interaction Interface Pymol
e3vr1D17	B:X,Y-1,Z->D:x,y,z	EF-G C-terminal domain-like	Interaction Interface Pymol
e3vr1D18	B:X,Y,Z->D:x,y,z	RIFT-related	Interaction Interface Pymol
e3vr1D16	B:X,Y,Z->D:x,y,z	P-loop domains-related	Interaction Interface Pymol