Domain ID e3vr5F4

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  • A: a/b three-layered sandwiches
  • X: P-loop domains-like
  • H: P-loop domains-related
  • T: P-loop containing nucleoside triphosphate hydrolases
  • F: ATP-synt_ab
UID: 001214057
Type: Automatic domain
Parent: e2jdiA3
Range: F:78-355
PDB: 3vr5
PDB Description: V-type sodium ATPase subunit B
UniProt: Q08637
Hsap BLAST neighbor: P21281
Species: Enterococcus hirae

Structure of domain e3vr5F4

Domains in the same chain:

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e3vr5F6 F:1-77 cradle loop barrel RIFT-related Alanine racemase-C
e3vr5F4 F:78-355 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e3vr5F5 F:356-453 C-terminal domain of alpha and beta subunits of F1 ATP synthase C-terminal domain of alpha and beta subunits of F1 ATP synthase C-terminal domain of alpha and beta subunits of F1 ATP synthase

Domains in the same PDB:

e3vr5A1 A:-6-63 cradle loop barrel RIFT-related Alanine racemase-C
e3vr5A3 A:64-441 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e3vr5A2 A:436-580 C-terminal domain of alpha and beta subunits of F1 ATP synthase C-terminal domain of alpha and beta subunits of F1 ATP synthase C-terminal domain of alpha and beta subunits of F1 ATP synthase
e3vr5B1 B:-6-69 cradle loop barrel RIFT-related Alanine racemase-C
e3vr5B3 B:70-441 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e3vr5B2 B:442-586 C-terminal domain of alpha and beta subunits of F1 ATP synthase C-terminal domain of alpha and beta subunits of F1 ATP synthase C-terminal domain of alpha and beta subunits of F1 ATP synthase
e3vr5C1 C:-6-62 cradle loop barrel RIFT-related Alanine racemase-C
e3vr5C3 C:70-441 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e3vr5C2 C:435-556 C-terminal domain of alpha and beta subunits of F1 ATP synthase C-terminal domain of alpha and beta subunits of F1 ATP synthase C-terminal domain of alpha and beta subunits of F1 ATP synthase
e3vr5D6 D:4-76 cradle loop barrel RIFT-related Alanine racemase-C
e3vr5D4 D:77-355 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e3vr5D5 D:356-455 C-terminal domain of alpha and beta subunits of F1 ATP synthase C-terminal domain of alpha and beta subunits of F1 ATP synthase C-terminal domain of alpha and beta subunits of F1 ATP synthase
e3vr5E6 E:4-77 cradle loop barrel RIFT-related Alanine racemase-C
e3vr5E4 E:78-355 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e3vr5E5 E:356-455 C-terminal domain of alpha and beta subunits of F1 ATP synthase C-terminal domain of alpha and beta subunits of F1 ATP synthase C-terminal domain of alpha and beta subunits of F1 ATP synthase
e3vr5F6 F:1-77 cradle loop barrel RIFT-related Alanine racemase-C
e3vr5F4 F:78-355 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e3vr5F5 F:356-453 C-terminal domain of alpha and beta subunits of F1 ATP synthase C-terminal domain of alpha and beta subunits of F1 ATP synthase C-terminal domain of alpha and beta subunits of F1 ATP synthase
e3vr5H1 H:2-101 Flavodoxin-like AtpF-like AtpF-like

Structural contacts of domain e3vr5F4 of H-group "P-loop domains-related":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e2jdiA3 F:x,y,z->C:X,Y,Z P-loop domains-related Interaction Interface Pymol
e3vr5C2 F:x,y,z->C:X,Y,Z C-terminal domain of alpha and beta subunits of F1 ATP synthase Interaction Interface Pymol
e3vr5C2 F:x,y,z->B:X,Y,Z C-terminal domain of alpha and beta subunits of F1 ATP synthase Interaction Interface Pymol
e3vr5C2 F:x,y,z->C:-X+1,Y-1/2,-Z-1/2 C-terminal domain of alpha and beta subunits of F1 ATP synthase Interaction Interface Pymol
e3vr5C2 F:x,y,z->C:-X+1,Y-1/2,-Z-1/2 C-terminal domain of alpha and beta subunits of F1 ATP synthase Interaction Interface Pymol