Domain ID e3vr9E1

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  • A: a/b three-layered sandwiches
  • X: Rossmann-like
  • H: Rossmann-related
  • T: FAD/NAD(P)-binding domain
  • F: FAD_binding_2
UID: 001837675
Type: Automatic domain
Parent: e2bs2A3
Range: E:33-269,E:390-485
Ligands: FAD MLI
PDB: 3vr9
PDB Description: Flavoprotein subunit of complex II
UniProt: Q33862
Hsap BLAST neighbor: P31040
Species: Ascaris suum

Structure of domain e3vr9E1

Domains in the same chain:

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e3vr9E1 E:33-269,E:390-485 Rossmann-like Rossmann-related FAD/NAD(P)-binding domain
e3vr9E3 E:270-389 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain
e3vr9E2 E:486-645 Spectrin repeat-like Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain

Domains in the same PDB:

e3vr9A3 A:33-269,A:390-485 Rossmann-like Rossmann-related FAD/NAD(P)-binding domain
e3vr9A1 A:270-389 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain
e3vr9A2 A:486-645 Spectrin repeat-like Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain
e3vr9B2 B:33-139 beta-Grasp Ubiquitin-related Ubiquitin-like
e3vr9B1 B:140-281 alpha-helical ferredoxin-like alpha-helical ferredoxin alpha-helical ferredoxin
e3vr9C1 C:34-186 Transmembrane heme-binding four-helical bundle Transmembrane heme-binding four-helical bundle Fumarate reductase respiratory complex transmembrane subunits
e3vr9D1 D:28-156 Transmembrane heme-binding four-helical bundle Transmembrane heme-binding four-helical bundle Fumarate reductase respiratory complex transmembrane subunits
e3vr9E1 E:33-269,E:390-485 Rossmann-like Rossmann-related FAD/NAD(P)-binding domain
e3vr9E3 E:270-389 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain
e3vr9E2 E:486-645 Spectrin repeat-like Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain
e3vr9F4 F:33-138 beta-Grasp Ubiquitin-related Ubiquitin-like
e3vr9F1 F:139-281 alpha-helical ferredoxin-like alpha-helical ferredoxin alpha-helical ferredoxin
e3vr9G1 G:34-186 Transmembrane heme-binding four-helical bundle Transmembrane heme-binding four-helical bundle Fumarate reductase respiratory complex transmembrane subunits
e3vr9H1 H:28-156 Transmembrane heme-binding four-helical bundle Transmembrane heme-binding four-helical bundle Fumarate reductase respiratory complex transmembrane subunits

Structural contacts of domain e3vr9E1 of H-group "Rossmann-related":

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The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e3vr9F4 E:X,Y,Z->F:x,y,z Ubiquitin-related Interaction Interface Pymol
e3vr9F1 E:X,Y,Z->F:x,y,z alpha-helical ferredoxin Interaction Interface Pymol
e3vr9H1 E:X,Y,Z->H:x,y,z Transmembrane heme-binding four-helical bundle Interaction Interface Pymol
e3vr9A2 E:x,y,z->A:-X-1,Y-1/2,-Z+1/2 Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain Interaction Interface Pymol
e3vr9A3 E:x,y,z->A:X,Y,Z Rossmann-related Interaction Interface Pymol
e3vr9F1 E:x,y,z->F:-X-1,Y-1/2,-Z+1/2 alpha-helical ferredoxin Interaction Interface Pymol
e3vr9G1 E:X,Y,Z->G:x,y,z Transmembrane heme-binding four-helical bundle Interaction Interface Pymol
e3vr9D1 E:X,Y,Z->D:x,y,z Transmembrane heme-binding four-helical bundle Interaction Interface Pymol