Domain ID e3vrdB3

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  • A: a/b three-layered sandwiches
  • X: Rossmann-like
  • H: Rossmann-related
  • T: FAD/NAD(P)-binding domain
  • F: Pyr_redox_2
UID: 000219789
Type: Automatic domain
Parent: e4gavB2
Range: B:2-114,B:256-326
Ligands: FAD GOL HEC
PDB: 3vrd
PDB Description: Flavocytochrome c flavin subunit
UniProt: D0G7Q4
Species: Thermochromatium tepidum

Structure of domain e3vrdB3

Structural contacts of domain e3vrdB3 of H-group "Rossmann-related":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e3vrdA1 B:x,y,z->A:X,Y,Z Cytochrome c Interaction Interface Pymol
e3vrdA2 B:x,y,z->A:-Y+1,X,Z Cytochrome c Interaction Interface Pymol
e3vrdA1 B:-Y+1/2,X+1/2,Z+1/2->A:x,y,z Cytochrome c Interaction Interface Pymol
e3vrdB3 B:x,y,z->B:-Y+1/2,X+1/2,Z-1/2 Rossmann-related Interaction Interface Pymol
e3vrdB2 B:-Y+1/2,X+1/2,Z-1/2->B:x,y,z FAD/NAD-linked reduatases, dimerisation (C-terminal) domain Interaction Interface Pymol
e3vrdB3 B:-Y+1/2,X+1/2,Z-1/2->B:x,y,z Rossmann-related Interaction Interface Pymol
e3vrdB3 B:x,y,z->B:-Y+1/2,X+1/2,Z+1/2 Rossmann-related Interaction Interface Pymol
e3vrdB2 B:-Y+1/2,X+1/2,Z+1/2->B:x,y,z FAD/NAD-linked reduatases, dimerisation (C-terminal) domain Interaction Interface Pymol
e3vrdB3 B:-Y+1/2,X+1/2,Z+1/2->B:x,y,z Rossmann-related Interaction Interface Pymol
e3vrdB2 B:x,y,z->B:-X,-Y+1,Z FAD/NAD-linked reduatases, dimerisation (C-terminal) domain Interaction Interface Pymol
e3vrdB3 B:x,y,z->B:-X,-Y+1,Z Rossmann-related Interaction Interface Pymol
e3vrdB3 B:-X,-Y+1,Z->B:x,y,z Rossmann-related Interaction Interface Pymol
e3vrdB2 B:-X,-Y+1,Z->B:x,y,z FAD/NAD-linked reduatases, dimerisation (C-terminal) domain Interaction Interface Pymol