Domain ID e3vylA1

Download files:
  • A: a/b barrels
  • X: TIM beta/alpha-barrel
  • H: TIM barrels
  • T: TIM barrels
  • F: AP_endonuc_2
UID: 001106636
Type: Automatic domain
Parent: e1qtwA1
Range: A:1-297
Ligands: MN MPD
PDB: 3vyl
PDB Description: L-RIBULOSE 3-EPIMERASE
UniProt: N0DP12
Species: Mesorhizobium loti

Structure of domain e3vylA1

Structural contacts of domain e3vylA1 of H-group "TIM barrels":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e3vylD1 A:X,Y,Z->D:x,y,z TIM barrels Interaction Interface Pymol
e3vylC1 A:X,Y,Z->C:x,y,z TIM barrels Interaction Interface Pymol
e3vylB1 A:X,Y,Z->B:x,y,z TIM barrels Interaction Interface Pymol
e3vylB1 A:X,-Y-1,-Z->B:x,y,z TIM barrels Interaction Interface Pymol
e3vylB1 A:x,y,z->B:-X,-Y-1,Z-1/2 TIM barrels Interaction Interface Pymol
e3vylA1 A:x,y,z->A:-X,Y,-Z-1/2 TIM barrels Interaction Interface Pymol
e3vylA1 A:-X,Y,-Z-1/2->A:x,y,z TIM barrels Interaction Interface Pymol
e3vylE1 A:x,y,z->E:-X-1/2,-Y-1/2,Z-1/2 TIM barrels Interaction Interface Pymol
e3vylC1 A:X,-Y-1,-Z->C:x,y,z TIM barrels Interaction Interface Pymol