Domain ID e3vypA2

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  • A: beta complex topology
  • X: L,D-transpeptidase catalytic domain-like
  • H: L,D-transpeptidase catalytic domain-like
  • T: L,D-transpeptidase catalytic domain-like
  • F: YkuD
UID: 001063075
Type: Automatic domain
Parent: e1zatA1
Range: A:240-408
Ligands: GOL MXR
PDB: 3vyp
PDB Description: PROBABLE CONSERVED LIPOPROTEIN LPPS
UniProt: I6Y9J2
Species: Mycobacterium tuberculosis

Structure of domain e3vypA2

Structural contacts of domain e3vypA2 of H-group "L,D-transpeptidase catalytic domain-like":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e3vypB1 A:x,y,z->B:X-1/2,-Y-1/2,-Z Immunoglobulin-related Interaction Interface Pymol
e3vypB2 A:x,y,z->B:X-1/2,-Y+1/2,-Z L,D-transpeptidase catalytic domain-like Interaction Interface Pymol
e3vypB2 A:X,Y,Z->B:x,y,z L,D-transpeptidase catalytic domain-like Interaction Interface Pymol
e3vypB1 A:X,Y,Z->B:x,y,z Immunoglobulin-related Interaction Interface Pymol
e3vypA2 A:x,y,z->A:-X+1,Y-1/2,-Z-1/2 L,D-transpeptidase catalytic domain-like Interaction Interface Pymol
e3vypA2 A:-X+1,Y-1/2,-Z-1/2->A:x,y,z L,D-transpeptidase catalytic domain-like Interaction Interface Pymol
e3vypA1 A:-X+1,Y-1/2,-Z-1/2->A:x,y,z Immunoglobulin-related Interaction Interface Pymol
e3vypB1 A:-X+1,Y-1/2,-Z-1/2->B:x,y,z Immunoglobulin-related Interaction Interface Pymol