Domain ID e3w3aM4

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  • A: a/b three-layered sandwiches
  • X: P-loop domains-like
  • H: P-loop domains-related
  • T: P-loop containing nucleoside triphosphate hydrolases
  • F: ATP-synt_ab
UID: 001214090
Type: Automatic domain
Parent: e2jdiA3
Range: M:81-365
Ligands: ADP
PDB: 3w3a
PDB Description: V-type ATP synthase beta chain
UniProt: Q56404
Hsap BLAST neighbor: P21281
Species:

Structure of domain e3w3aM4

Domains in the same chain:

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e3w3aM1 M:7-80 cradle loop barrel RIFT-related Alanine racemase-C
e3w3aM4 M:81-365 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e3w3aM5 M:366-463 C-terminal domain of alpha and beta subunits of F1 ATP synthase C-terminal domain of alpha and beta subunits of F1 ATP synthase C-terminal domain of alpha and beta subunits of F1 ATP synthase

Domains in the same PDB:

e3w3aA1 A:1-70 cradle loop barrel RIFT-related Alanine racemase-C
e3w3aA4 A:70-111,A:184-436 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e3w3aA3 A:109-183 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Single hybrid motif
e3w3aA5 A:438-577 C-terminal domain of alpha and beta subunits of F1 ATP synthase C-terminal domain of alpha and beta subunits of F1 ATP synthase C-terminal domain of alpha and beta subunits of F1 ATP synthase
e3w3aB1 B:1-70 cradle loop barrel RIFT-related Alanine racemase-C
e3w3aB4 B:70-111,B:184-436 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e3w3aB3 B:109-183 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Single hybrid motif
e3w3aB5 B:438-577 C-terminal domain of alpha and beta subunits of F1 ATP synthase C-terminal domain of alpha and beta subunits of F1 ATP synthase C-terminal domain of alpha and beta subunits of F1 ATP synthase
e3w3aC1 C:1-70 cradle loop barrel RIFT-related Alanine racemase-C
e3w3aC4 C:70-111,C:184-436 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e3w3aC3 C:109-183 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Single hybrid motif
e3w3aC5 C:438-577 C-terminal domain of alpha and beta subunits of F1 ATP synthase C-terminal domain of alpha and beta subunits of F1 ATP synthase C-terminal domain of alpha and beta subunits of F1 ATP synthase
e3w3aD1 D:7-80 cradle loop barrel RIFT-related Alanine racemase-C
e3w3aD4 D:81-365 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e3w3aD5 D:366-463 C-terminal domain of alpha and beta subunits of F1 ATP synthase C-terminal domain of alpha and beta subunits of F1 ATP synthase C-terminal domain of alpha and beta subunits of F1 ATP synthase
e3w3aE1 E:7-80 cradle loop barrel RIFT-related Alanine racemase-C
e3w3aE4 E:81-365 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e3w3aE5 E:366-463 C-terminal domain of alpha and beta subunits of F1 ATP synthase C-terminal domain of alpha and beta subunits of F1 ATP synthase C-terminal domain of alpha and beta subunits of F1 ATP synthase
e3w3aF1 F:7-80 cradle loop barrel RIFT-related Alanine racemase-C
e3w3aF4 F:81-365 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e3w3aF5 F:366-463 C-terminal domain of alpha and beta subunits of F1 ATP synthase C-terminal domain of alpha and beta subunits of F1 ATP synthase C-terminal domain of alpha and beta subunits of F1 ATP synthase
e3w3aH1 H:1-100 Flavodoxin-like AtpF-like AtpF-like
e3w3aI1 I:1-70 cradle loop barrel RIFT-related Alanine racemase-C
e3w3aI4 I:70-111,I:184-436 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e3w3aI3 I:109-183 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Single hybrid motif
e3w3aI5 I:438-577 C-terminal domain of alpha and beta subunits of F1 ATP synthase C-terminal domain of alpha and beta subunits of F1 ATP synthase C-terminal domain of alpha and beta subunits of F1 ATP synthase
e3w3aJ1 J:1-70 cradle loop barrel RIFT-related Alanine racemase-C
e3w3aJ4 J:70-111,J:184-436 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e3w3aJ3 J:109-183 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Single hybrid motif
e3w3aJ5 J:438-577 C-terminal domain of alpha and beta subunits of F1 ATP synthase C-terminal domain of alpha and beta subunits of F1 ATP synthase C-terminal domain of alpha and beta subunits of F1 ATP synthase
e3w3aK1 K:1-70 cradle loop barrel RIFT-related Alanine racemase-C
e3w3aK4 K:70-111,K:184-436 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e3w3aK3 K:109-183 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Single hybrid motif
e3w3aK5 K:438-577 C-terminal domain of alpha and beta subunits of F1 ATP synthase C-terminal domain of alpha and beta subunits of F1 ATP synthase C-terminal domain of alpha and beta subunits of F1 ATP synthase
e3w3aL1 L:7-80 cradle loop barrel RIFT-related Alanine racemase-C
e3w3aL4 L:81-365 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e3w3aL5 L:366-463 C-terminal domain of alpha and beta subunits of F1 ATP synthase C-terminal domain of alpha and beta subunits of F1 ATP synthase C-terminal domain of alpha and beta subunits of F1 ATP synthase
e3w3aM1 M:7-80 cradle loop barrel RIFT-related Alanine racemase-C
e3w3aM4 M:81-365 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e3w3aM5 M:366-463 C-terminal domain of alpha and beta subunits of F1 ATP synthase C-terminal domain of alpha and beta subunits of F1 ATP synthase C-terminal domain of alpha and beta subunits of F1 ATP synthase
e3w3aN1 N:7-80 cradle loop barrel RIFT-related Alanine racemase-C
e3w3aN4 N:81-365 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e3w3aN5 N:366-463 C-terminal domain of alpha and beta subunits of F1 ATP synthase C-terminal domain of alpha and beta subunits of F1 ATP synthase C-terminal domain of alpha and beta subunits of F1 ATP synthase
e3w3aP1 P:1-100 Flavodoxin-like AtpF-like AtpF-like

Structural contacts of domain e3w3aM4 of H-group "P-loop domains-related":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e3w3aK4 M:x,y,z->K:X,Y,Z P-loop domains-related Interaction Interface Pymol
e3w3aK5 M:x,y,z->K:X,Y,Z C-terminal domain of alpha and beta subunits of F1 ATP synthase Interaction Interface Pymol
e3w3aJ4 M:x,y,z->J:X,Y,Z P-loop domains-related Interaction Interface Pymol
e3w3aJ1 M:x,y,z->J:X,Y,Z RIFT-related Interaction Interface Pymol