Domain ID e3w5oA4

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  • A: alpha bundles
  • X: ATP-dependent DNA ligase DNA-binding domain
  • H: ATP-dependent DNA ligase DNA-binding domain
  • T: ATP-dependent DNA ligase DNA-binding domain
  • F: DNA_ligase_A_N
UID: 001131615
Type: Automatic domain
Parent: e1x9nA2
Range: A:8-133
Ligands: SO4
PDB: 3w5o
PDB Description: DNA LIGASE 4
UniProt: P49917
Hsap BLAST neighbor: P49917
Species: Homo sapiens

Structure of domain e3w5oA4

Domains in the same chain:

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e3w5oA4 A:8-133 ATP-dependent DNA ligase DNA-binding domain ATP-dependent DNA ligase DNA-binding domain ATP-dependent DNA ligase DNA-binding domain
e3w5oA15 A:134-239 ATP-dependent DNA ligase DNA-binding domain ATP-dependent DNA ligase DNA-binding domain ATP-dependent DNA ligase DNA-binding domain
e3w5oA1 A:240-458 Protein kinase/SAICAR synthase/ATP-grasp Protein kinase/SAICAR synthase/ATP-grasp ATP-grasp
e3w5oA14 A:460-603 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins

Domains in the same PDB:

e3w5oA4 A:8-133 ATP-dependent DNA ligase DNA-binding domain ATP-dependent DNA ligase DNA-binding domain ATP-dependent DNA ligase DNA-binding domain
e3w5oA15 A:134-239 ATP-dependent DNA ligase DNA-binding domain ATP-dependent DNA ligase DNA-binding domain ATP-dependent DNA ligase DNA-binding domain
e3w5oA1 A:240-458 Protein kinase/SAICAR synthase/ATP-grasp Protein kinase/SAICAR synthase/ATP-grasp ATP-grasp
e3w5oA14 A:460-603 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e3w5oB4 B:8-133 ATP-dependent DNA ligase DNA-binding domain ATP-dependent DNA ligase DNA-binding domain ATP-dependent DNA ligase DNA-binding domain
e3w5oB15 B:134-239 ATP-dependent DNA ligase DNA-binding domain ATP-dependent DNA ligase DNA-binding domain ATP-dependent DNA ligase DNA-binding domain
e3w5oB1 B:240-458 Protein kinase/SAICAR synthase/ATP-grasp Protein kinase/SAICAR synthase/ATP-grasp ATP-grasp
e3w5oB14 B:460-603 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins

Structural contacts of domain e3w5oA4 of H-group "ATP-dependent DNA ligase DNA-binding domain":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e3w5oA1 A:x,y,z->A:-X-1,Y-1/2,-Z Protein kinase/SAICAR synthase/ATP-grasp Interaction Interface Pymol
e3w5oB14 A:-X,Y-1/2,-Z-1->B:x,y,z Nucleic acid-binding proteins Interaction Interface Pymol