Domain ID e3wg7S1

Download files:
  • A: few secondary structure elements
  • X: Rubredoxin-like
  • H: Rubredoxin-related
  • T: Cytochrome c oxidase Subunit F
  • F: COX5B
UID: 001288556
Type: Automatic domain
Parent: e1v54F1
Range: S:1-98
Ligands: PEK ZN
PDB: 3wg7
PDB Description: Cytochrome c oxidase subunit 5B, mitochondrial
UniProt: P00428
Hsap BLAST neighbor: P10606
Species: Bos taurus

Structure of domain e3wg7S1

Domains in the same chain:

e3wg7S1 S:1-98 Rubredoxin-like Rubredoxin-related Cytochrome c oxidase Subunit F

Domains in the same PDB:

e3wg7A1 A:1-514 Cytochrome c oxidase subunit I-like Cytochrome c oxidase subunit I-like Cytochrome c oxidase subunit I-like
e3wg7B2 B:1-90 Cytochrome c oxidase subunit II-like, transmembrane region Cytochrome c oxidase subunit II-like, transmembrane region Cytochrome c oxidase subunit II-like, transmembrane region
e3wg7B1 B:91-227 Cupredoxin-like Cupredoxin-related Cupredoxin-related
e3wg7C1 C:3-261 Cytochrome c oxidase subunit III-like Cytochrome c oxidase subunit III-like Cytochrome c oxidase subunit III-like
e3wg7D1 D:4-147 Mitochondrial cytochrome c oxidase subunit IV Mitochondrial cytochrome c oxidase subunit IV Mitochondrial cytochrome c oxidase subunit IV
e3wg7E1 E:5-109 Repetitive alpha hairpins Cytochrome c oxidase subunit E Cytochrome c oxidase subunit E
e3wg7F1 F:1-98 Rubredoxin-like Rubredoxin-related Cytochrome c oxidase Subunit F
e3wg7G1 G:1-84 Mitochondrial cytochrome c oxidase subunit VIa Mitochondrial cytochrome c oxidase subunit VIa Mitochondrial cytochrome c oxidase subunit VIa
e3wg7H1 H:7-85 Cytochrome c oxidase subunit h Cytochrome c oxidase subunit h Cytochrome c oxidase subunit h
e3wg7I1 I:1-73 Mitochondrial cytochrome c oxidase subunit VIc Mitochondrial cytochrome c oxidase subunit VIc Mitochondrial cytochrome c oxidase subunit VIc
e3wg7J1 J:1-58 Mitochondrial cytochrome c oxidase subunit VIIa Mitochondrial cytochrome c oxidase subunit VIIa Mitochondrial cytochrome c oxidase subunit VIIa
e3wg7K1 K:6-54 Mitochondrial cytochrome c oxidase subunit VIIb Mitochondrial cytochrome c oxidase subunit VIIb Mitochondrial cytochrome c oxidase subunit VIIb
e3wg7L1 L:2-47 Mitochondrial cytochrome c oxidase subunit VIIc (aka VIIIa) Mitochondrial cytochrome c oxidase subunit VIIc (aka VIIIa) Mitochondrial cytochrome c oxidase subunit VIIc (aka VIIIa)
e3wg7M1 M:1-43 Mitochondrial cytochrome c oxidase subunit VIIIb (aka IX) Mitochondrial cytochrome c oxidase subunit VIIIb (aka IX) Mitochondrial cytochrome c oxidase subunit VIIIb (aka IX)
e3wg7N1 N:1-514 Cytochrome c oxidase subunit I-like Cytochrome c oxidase subunit I-like Cytochrome c oxidase subunit I-like
e3wg7O2 O:1-90 Cytochrome c oxidase subunit II-like, transmembrane region Cytochrome c oxidase subunit II-like, transmembrane region Cytochrome c oxidase subunit II-like, transmembrane region
e3wg7O1 O:91-227 Cupredoxin-like Cupredoxin-related Cupredoxin-related
e3wg7P1 P:3-261 Cytochrome c oxidase subunit III-like Cytochrome c oxidase subunit III-like Cytochrome c oxidase subunit III-like
e3wg7Q1 Q:4-147 Mitochondrial cytochrome c oxidase subunit IV Mitochondrial cytochrome c oxidase subunit IV Mitochondrial cytochrome c oxidase subunit IV
e3wg7R1 R:5-109 Repetitive alpha hairpins Cytochrome c oxidase subunit E Cytochrome c oxidase subunit E
e3wg7S1 S:1-98 Rubredoxin-like Rubredoxin-related Cytochrome c oxidase Subunit F
e3wg7T1 T:1-84 Mitochondrial cytochrome c oxidase subunit VIa Mitochondrial cytochrome c oxidase subunit VIa Mitochondrial cytochrome c oxidase subunit VIa
e3wg7U1 U:7-85 Cytochrome c oxidase subunit h Cytochrome c oxidase subunit h Cytochrome c oxidase subunit h
e3wg7V1 V:1-73 Mitochondrial cytochrome c oxidase subunit VIc Mitochondrial cytochrome c oxidase subunit VIc Mitochondrial cytochrome c oxidase subunit VIc
e3wg7W1 W:1-58 Mitochondrial cytochrome c oxidase subunit VIIa Mitochondrial cytochrome c oxidase subunit VIIa Mitochondrial cytochrome c oxidase subunit VIIa
e3wg7X1 X:6-54 Mitochondrial cytochrome c oxidase subunit VIIb Mitochondrial cytochrome c oxidase subunit VIIb Mitochondrial cytochrome c oxidase subunit VIIb
e3wg7Y1 Y:2-47 Mitochondrial cytochrome c oxidase subunit VIIc (aka VIIIa) Mitochondrial cytochrome c oxidase subunit VIIc (aka VIIIa) Mitochondrial cytochrome c oxidase subunit VIIc (aka VIIIa)
e3wg7Z1 Z:1-43 Mitochondrial cytochrome c oxidase subunit VIIIb (aka IX) Mitochondrial cytochrome c oxidase subunit VIIIb (aka IX) Mitochondrial cytochrome c oxidase subunit VIIIb (aka IX)

Structural contacts of domain e3wg7S1 of H-group "Rubredoxin-related":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e3wg7N1 S:x,y,z->N:X,Y,Z Cytochrome c oxidase subunit I-like Interaction Interface Pymol
e3wg7P1 S:x,y,z->P:X,Y,Z Cytochrome c oxidase subunit III-like Interaction Interface Pymol
e3wg7O1 S:-X+3/2,-Y+3,Z-1/2->O:x,y,z Cupredoxin-related Interaction Interface Pymol
e3wg7Q1 S:-X+3/2,-Y+3,Z-1/2->Q:x,y,z Mitochondrial cytochrome c oxidase subunit IV Interaction Interface Pymol
e3wg7R1 S:x,y,z->R:X,Y,Z Cytochrome c oxidase subunit E Interaction Interface Pymol
e3wg7W1 S:X,Y,Z->W:x,y,z Mitochondrial cytochrome c oxidase subunit VIIa Interaction Interface Pymol
e3wg7Q1 S:x,y,z->Q:X,Y,Z Mitochondrial cytochrome c oxidase subunit IV Interaction Interface Pymol
e3wg7F1 S:x,y,z->F:X,Y,Z Rubredoxin-related Interaction Interface Pymol
e3wg7T1 S:X,Y,Z->T:x,y,z Mitochondrial cytochrome c oxidase subunit VIa Interaction Interface Pymol
e3wg7G1 S:X,Y,Z->G:x,y,z Mitochondrial cytochrome c oxidase subunit VIa Interaction Interface Pymol