Domain ID e3wofS1

Download files:
  • A: a+b complex topology
  • X: alpha/beta-Hammerhead/Barrel-sandwich hybrid
  • H: alpha/beta-Hammerhead/Barrel-sandwich hybrid
  • T: Single hybrid motif
  • F: RNA_pol_Rpb2_6
UID: 001499843
Type: Automatic domain
Parent: e4kmuC6
Range: S:702-830
PDB: 3wof
PDB Description: DNA-directed RNA polymerase subunit beta
UniProt: Q8RQE9
Species:

Structure of domain e3wofS1

Domains in the same chain:

e3wofS1 S:702-830 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Single hybrid motif

Domains in the same PDB:

e3wofA1 A:701-829 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Single hybrid motif
e3wofB1 B:6-107 Cystatin-like Thermus phage P23-45 gp39 Thermus phage P23-45 gp39
e3wofC1 C:701-829 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Single hybrid motif
e3wofD1 D:5-107 Cystatin-like Thermus phage P23-45 gp39 Thermus phage P23-45 gp39
e3wofE1 E:703-829 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Single hybrid motif
e3wofF1 F:5-107 Cystatin-like Thermus phage P23-45 gp39 Thermus phage P23-45 gp39
e3wofG1 G:702-830 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Single hybrid motif
e3wofH1 H:6-107 Cystatin-like Thermus phage P23-45 gp39 Thermus phage P23-45 gp39
e3wofI1 I:702-830 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Single hybrid motif
e3wofJ1 J:6-107 Cystatin-like Thermus phage P23-45 gp39 Thermus phage P23-45 gp39
e3wofK1 K:702-829 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Single hybrid motif
e3wofL1 L:6-107 Cystatin-like Thermus phage P23-45 gp39 Thermus phage P23-45 gp39
e3wofM1 M:703-830 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Single hybrid motif
e3wofN1 N:5-107 Cystatin-like Thermus phage P23-45 gp39 Thermus phage P23-45 gp39
e3wofO1 O:702-830 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Single hybrid motif
e3wofP1 P:6-107 Cystatin-like Thermus phage P23-45 gp39 Thermus phage P23-45 gp39
e3wofQ1 Q:703-829 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Single hybrid motif
e3wofR1 R:6-107 Cystatin-like Thermus phage P23-45 gp39 Thermus phage P23-45 gp39
e3wofS1 S:702-830 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Single hybrid motif
e3wofT1 T:6-107 Cystatin-like Thermus phage P23-45 gp39 Thermus phage P23-45 gp39
e3wofU1 U:707-827 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Single hybrid motif
e3wofV1 V:6-107 Cystatin-like Thermus phage P23-45 gp39 Thermus phage P23-45 gp39
e3wofW1 W:702-830 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Single hybrid motif
e3wofX1 X:6-107 Cystatin-like Thermus phage P23-45 gp39 Thermus phage P23-45 gp39

Structural contacts of domain e3wofS1 of H-group "alpha/beta-Hammerhead/Barrel-sandwich hybrid":

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The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e3wofT1 S:X,Y,Z->T:x,y,z Thermus phage P23-45 gp39 Interaction Interface Pymol
e3wofN1 S:X,Y,Z->N:x,y,z Thermus phage P23-45 gp39 Interaction Interface Pymol
e3wofL1 S:X,Y,Z->L:x,y,z Thermus phage P23-45 gp39 Interaction Interface Pymol
e3wofK1 S:x,y,z->K:X,Y,Z alpha/beta-Hammerhead/Barrel-sandwich hybrid Interaction Interface Pymol
e3wofS1 S:x,y,z->S:Y,X,-Z alpha/beta-Hammerhead/Barrel-sandwich hybrid Interaction Interface Pymol
e3wofS1 S:Y,X,-Z->S:x,y,z alpha/beta-Hammerhead/Barrel-sandwich hybrid Interaction Interface Pymol
e3wofM1 S:x,y,z->M:X,Y,Z alpha/beta-Hammerhead/Barrel-sandwich hybrid Interaction Interface Pymol
e3wofA1 S:x,y,z->A:X,Y,Z alpha/beta-Hammerhead/Barrel-sandwich hybrid Interaction Interface Pymol