Domain ID e3wqzB6

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  • A: a+b three layers
  • X: Class II aaRS and biotin synthetases
  • H: Class II aaRS and biotin synthetases
  • T: Class II aaRS and biotin synthetases
  • F: tRNA-synt_2c
UID: 001299382
Type: Automatic domain
Parent: e1riqA2
Range: B:1-256
Ligands: A5A
PDB: 3wqz
PDB Description: Alanine--tRNA ligase
UniProt: O28029
Hsap BLAST neighbor: Q5JTZ9
Species:

Structure of domain e3wqzB6

Domains in the same chain:

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e3wqzB6 B:1-256 Class II aaRS and biotin synthetases Class II aaRS and biotin synthetases Class II aaRS and biotin synthetases
e3wqzB4 B:257-487 Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS)
e3wqzB1 B:488-588 cradle loop barrel RIFT-related Alanine racemase-C
e3wqzB3 B:589-737 LuxS, MPP, ThrRS/AlaRS common domain LuxS, MPP, ThrRS/AlaRS common domain ThrRS/AlaRS editing domain
e3wqzB5 B:738-784 C-terminal helical domain of alanine-tRNA ligase C-terminal helical domain of alanine-tRNA ligase Archaeal C-Ala helical domain
e3wqzB2 B:785-904 C-terminal domain in DHH phosphoesterases C-terminal domain in DHH phosphoesterases C-terminal domain in DHH phosphoesterases

Domains in the same PDB:

e3wqzA6 A:2-256 Class II aaRS and biotin synthetases Class II aaRS and biotin synthetases Class II aaRS and biotin synthetases
e3wqzA4 A:257-487 Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS)
e3wqzA1 A:488-588 cradle loop barrel RIFT-related Alanine racemase-C
e3wqzA3 A:589-737 LuxS, MPP, ThrRS/AlaRS common domain LuxS, MPP, ThrRS/AlaRS common domain ThrRS/AlaRS editing domain
e3wqzA5 A:738-784 C-terminal helical domain of alanine-tRNA ligase C-terminal helical domain of alanine-tRNA ligase Archaeal C-Ala helical domain
e3wqzA2 A:785-906 C-terminal domain in DHH phosphoesterases C-terminal domain in DHH phosphoesterases C-terminal domain in DHH phosphoesterases
e3wqzB6 B:1-256 Class II aaRS and biotin synthetases Class II aaRS and biotin synthetases Class II aaRS and biotin synthetases
e3wqzB4 B:257-487 Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS)
e3wqzB1 B:488-588 cradle loop barrel RIFT-related Alanine racemase-C
e3wqzB3 B:589-737 LuxS, MPP, ThrRS/AlaRS common domain LuxS, MPP, ThrRS/AlaRS common domain ThrRS/AlaRS editing domain
e3wqzB5 B:738-784 C-terminal helical domain of alanine-tRNA ligase C-terminal helical domain of alanine-tRNA ligase Archaeal C-Ala helical domain
e3wqzB2 B:785-904 C-terminal domain in DHH phosphoesterases C-terminal domain in DHH phosphoesterases C-terminal domain in DHH phosphoesterases

Structural contacts of domain e3wqzB6 of H-group "Class II aaRS and biotin synthetases":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e3wqzA4 B:-X-1/2,-Y,Z-1/2->A:x,y,z Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) Interaction Interface Pymol
e3wqzA6 B:x,y,z->A:-X,Y-1/2,-Z+1/2 Class II aaRS and biotin synthetases Interaction Interface Pymol
e3wqzA4 B:x,y,z->A:-X,Y-1/2,-Z+1/2 Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) Interaction Interface Pymol
e3wqzA1 B:X-1,Y,Z->A:x,y,z RIFT-related Interaction Interface Pymol