ECOD: domain e3zd6A3

Domain ID e3zd6A3

A: beta complex topology
X: ETN0001 domain-like
H: ETN0001 domain-like
T: Mss4-like
F: RIG-I_C-RD

UID:	001087866
Type:	Automatic domain
Parent:	e2rqbA1
Range:	A:792-921
Ligands:	ZN
PDB:	3zd6
PDB Description:	PROBABLE ATP-DEPENDENT RNA HELICASE DDX58
UniProt:	O95786
Hsap BLAST neighbor:	O95786
Species:	Homo sapiens

Domain
In chain context
In PDB context

Structure of domain e3zd6A3

Domains in the same chain:

Download Pymol

e3zd6A2	A:236-453	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e3zd6A5	A:454-606	Helical bundle insertion in helicase domains	Helical bundle in Hef helicase	Helical bundle in Hef helicase
e3zd6A4	A:607-661,A:691-795	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e3zd6A3	A:792-921	ETN0001 domain-like	ETN0001 domain-like	Mss4-like

Domains in the same PDB:

e3zd6A2	A:236-453	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e3zd6A5	A:454-606	Helical bundle insertion in helicase domains	Helical bundle in Hef helicase	Helical bundle in Hef helicase
e3zd6A4	A:607-661,A:691-795	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e3zd6A3	A:792-921	ETN0001 domain-like	ETN0001 domain-like	Mss4-like

Structural contacts of domain e3zd6A3 of H-group "ETN0001 domain-like":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e2rqbA1	A:x,y,z->A:-X-1,Y-1/2,-Z-1/2	ETN0001 domain-like	Interaction Interface Pymol
e2rqbA1	A:x,y,z->A:X,Y-1,Z	ETN0001 domain-like	Interaction Interface Pymol