Domain ID e3zdyB1

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  • A: a/b three-layered sandwiches
  • X: HAD domain-like
  • H: HAD domain-related
  • T: vWA-like
  • F: Integrin_beta
UID: 001411303
Type: Automatic domain
Parent: e1tyeB3
Range: B:107-354
Ligands: CA MG NAG SO4
PDB: 3zdy
PDB Description: INTEGRIN BETA-3
UniProt: P05106
Hsap BLAST neighbor: P05106
Species: Homo sapiens

Structure of domain e3zdyB1

Domains in the same chain:

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e3zdyB4 B:3-57 Trefoil/Plexin domain-like Trefoil/Plexin domain-like Trefoil/Plexin domain-like
e3zdyB2 B:58-106,B:355-440 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3zdyB1 B:107-354 HAD domain-like HAD domain-related vWA-like

Domains in the same PDB:

e3zdyA1 A:1-454 beta-propeller-like beta-propeller 7-bladed
e3zdyB4 B:3-57 Trefoil/Plexin domain-like Trefoil/Plexin domain-like Trefoil/Plexin domain-like
e3zdyB2 B:58-106,B:355-440 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3zdyB1 B:107-354 HAD domain-like HAD domain-related vWA-like
e3zdyC1 C:1-453 beta-propeller-like beta-propeller 7-bladed
e3zdyD2 D:3-57 Trefoil/Plexin domain-like Trefoil/Plexin domain-like Trefoil/Plexin domain-like
e3zdyD4 D:58-106,D:355-440 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3zdyD5 D:107-354 HAD domain-like HAD domain-related vWA-like
e3zdyD6 D:441-471 EGF-like EGF-related EGF/Laminin
e3zdyE2 E:1-119 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3zdyE1 E:120-216 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3zdyF1 F:1-107 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3zdyF2 F:108-214 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3zdyH2 H:1-119 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3zdyH1 H:120-216 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3zdyL1 L:1-107 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3zdyL2 L:108-214 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like

Structural contacts of domain e3zdyB1 of H-group "HAD domain-related":

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The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e3zdyA1 B:x,y,z->A:X,Y,Z beta-propeller Interaction Interface Pymol
e3zdyA1 B:-X+1/2,Y-1/2,-Z+1->A:x,y,z beta-propeller Interaction Interface Pymol
e3zdyD5 B:X,Y,Z->D:x,y,z HAD domain-related Interaction Interface Pymol
e3zdyC1 B:-X+1/2,Y-1/2,-Z+2->C:x,y,z beta-propeller Interaction Interface Pymol