Domain ID e3zfzA5

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  • A: beta complex topology
  • X: Penicillin binding protein dimerisation domain
  • H: Penicillin binding protein dimerisation domain
  • T: Penicillin binding protein dimerisation domain
  • F: PBP_dimer
UID: 001278478
Type: Automatic domain
Parent: e1rp5A6
Range: A:139-167,A:239-326
Ligands: 1W8 CD CL MUR
PDB: 3zfz
PDB Description: PENICILLIN BINDING PROTEIN 2 PRIME
UniProt: Q54113
Species:

Structure of domain e3zfzA5

Domains in the same chain:

e3zfzA7 A:27-138 Cystatin-like NTF2-like NTF2-like
e3zfzA5 A:139-167,A:239-326 Penicillin binding protein dimerisation domain Penicillin binding protein dimerisation domain Penicillin binding protein dimerisation domain
e3zfzA6 A:168-238 ClpS-like Penicillin binding protein ClpS-like domain Penicillin binding protein ClpS-like domain
e3zfzA3 A:327-398,A:525-668 Profilin-like a+b domain in beta-lactamase/transpeptidase-like proteins a+b domain in beta-lactamase/transpeptidase-like proteins
e3zfzA1 A:399-524 alpha-helical domain in beta-lactamase/transpeptidase-like proteins alpha-helical domain in beta-lactamase/transpeptidase-like proteins alpha-helical domain in beta-lactamase/transpeptidase-like proteins

Domains in the same PDB:

e3zfzA7 A:27-138 Cystatin-like NTF2-like NTF2-like
e3zfzA5 A:139-167,A:239-326 Penicillin binding protein dimerisation domain Penicillin binding protein dimerisation domain Penicillin binding protein dimerisation domain
e3zfzA6 A:168-238 ClpS-like Penicillin binding protein ClpS-like domain Penicillin binding protein ClpS-like domain
e3zfzA3 A:327-398,A:525-668 Profilin-like a+b domain in beta-lactamase/transpeptidase-like proteins a+b domain in beta-lactamase/transpeptidase-like proteins
e3zfzA1 A:399-524 alpha-helical domain in beta-lactamase/transpeptidase-like proteins alpha-helical domain in beta-lactamase/transpeptidase-like proteins alpha-helical domain in beta-lactamase/transpeptidase-like proteins
e3zfzB7 B:27-138 Cystatin-like NTF2-like NTF2-like
e3zfzB5 B:139-167,B:239-326 Penicillin binding protein dimerisation domain Penicillin binding protein dimerisation domain Penicillin binding protein dimerisation domain
e3zfzB6 B:168-238 ClpS-like Penicillin binding protein ClpS-like domain Penicillin binding protein ClpS-like domain
e3zfzB3 B:327-398,B:525-668 Profilin-like a+b domain in beta-lactamase/transpeptidase-like proteins a+b domain in beta-lactamase/transpeptidase-like proteins
e3zfzB1 B:399-524 alpha-helical domain in beta-lactamase/transpeptidase-like proteins alpha-helical domain in beta-lactamase/transpeptidase-like proteins alpha-helical domain in beta-lactamase/transpeptidase-like proteins

Structural contacts of domain e3zfzA5 of H-group "Penicillin binding protein dimerisation domain":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e3zfzB3 A:X,Y,Z->B:x,y,z a+b domain in beta-lactamase/transpeptidase-like proteins Interaction Interface Pymol
e3zfzB6 A:X,Y,Z->B:x,y,z Penicillin binding protein ClpS-like domain Interaction Interface Pymol
e3zfzB5 A:X,Y,Z->B:x,y,z Penicillin binding protein dimerisation domain Interaction Interface Pymol
e3zfzB7 A:X,Y,Z->B:x,y,z NTF2-like Interaction Interface Pymol
e3zfzB3 A:x,y,z->B:-X,Y-1/2,-Z+1/2 a+b domain in beta-lactamase/transpeptidase-like proteins Interaction Interface Pymol
e3zfzB1 A:x,y,z->B:-X,Y-1/2,-Z+1/2 alpha-helical domain in beta-lactamase/transpeptidase-like proteins Interaction Interface Pymol