Domain ID e3zifM1

Download files:
  • A: beta sandwiches
  • X: jelly-roll
  • H: Jelly-roll domain in Adenovirus penton base protein
  • T: Jelly-roll domain in Adenovirus penton base protein
  • F: Adeno_Penton_B
UID: 001140559
Type: Automatic domain
Parent: e1x9pA1
Range: M:31-134,M:345-480
PDB: 3zif
PDB Description: PENTON PROTEIN
UniProt: O71096
Species:

Structure of domain e3zifM1

Domains in the same chain:

e3zifM1 M:31-134,M:345-480 jelly-roll Jelly-roll domain in Adenovirus penton base protein Jelly-roll domain in Adenovirus penton base protein
e3zifM2 M:128-344 Insertion domain in Adenovirus penton base protein Insertion domain in Adenovirus penton base protein Insertion domain in Adenovirus penton base protein

Domains in the same PDB:

e3zifA1 A:7-597 jelly-roll Nucleoplasmin-like/VP (viral coat and capsid proteins) Nucleoplasmin-like/VP (viral coat and capsid proteins)
e3zifA2 A:588-909 jelly-roll Nucleoplasmin-like/VP (viral coat and capsid proteins) Nucleoplasmin-like/VP (viral coat and capsid proteins)
e3zifB1 B:7-597 jelly-roll Nucleoplasmin-like/VP (viral coat and capsid proteins) Nucleoplasmin-like/VP (viral coat and capsid proteins)
e3zifB2 B:588-909 jelly-roll Nucleoplasmin-like/VP (viral coat and capsid proteins) Nucleoplasmin-like/VP (viral coat and capsid proteins)
e3zifC1 C:7-597 jelly-roll Nucleoplasmin-like/VP (viral coat and capsid proteins) Nucleoplasmin-like/VP (viral coat and capsid proteins)
e3zifC2 C:588-909 jelly-roll Nucleoplasmin-like/VP (viral coat and capsid proteins) Nucleoplasmin-like/VP (viral coat and capsid proteins)
e3zifD1 D:7-597 jelly-roll Nucleoplasmin-like/VP (viral coat and capsid proteins) Nucleoplasmin-like/VP (viral coat and capsid proteins)
e3zifD2 D:588-909 jelly-roll Nucleoplasmin-like/VP (viral coat and capsid proteins) Nucleoplasmin-like/VP (viral coat and capsid proteins)
e3zifE1 E:7-597 jelly-roll Nucleoplasmin-like/VP (viral coat and capsid proteins) Nucleoplasmin-like/VP (viral coat and capsid proteins)
e3zifE2 E:588-909 jelly-roll Nucleoplasmin-like/VP (viral coat and capsid proteins) Nucleoplasmin-like/VP (viral coat and capsid proteins)
e3zifF1 F:7-597 jelly-roll Nucleoplasmin-like/VP (viral coat and capsid proteins) Nucleoplasmin-like/VP (viral coat and capsid proteins)
e3zifF2 F:588-909 jelly-roll Nucleoplasmin-like/VP (viral coat and capsid proteins) Nucleoplasmin-like/VP (viral coat and capsid proteins)
e3zifG1 G:7-597 jelly-roll Nucleoplasmin-like/VP (viral coat and capsid proteins) Nucleoplasmin-like/VP (viral coat and capsid proteins)
e3zifG2 G:588-909 jelly-roll Nucleoplasmin-like/VP (viral coat and capsid proteins) Nucleoplasmin-like/VP (viral coat and capsid proteins)
e3zifH1 H:7-597 jelly-roll Nucleoplasmin-like/VP (viral coat and capsid proteins) Nucleoplasmin-like/VP (viral coat and capsid proteins)
e3zifH2 H:588-909 jelly-roll Nucleoplasmin-like/VP (viral coat and capsid proteins) Nucleoplasmin-like/VP (viral coat and capsid proteins)
e3zifI1 I:7-597 jelly-roll Nucleoplasmin-like/VP (viral coat and capsid proteins) Nucleoplasmin-like/VP (viral coat and capsid proteins)
e3zifI2 I:588-909 jelly-roll Nucleoplasmin-like/VP (viral coat and capsid proteins) Nucleoplasmin-like/VP (viral coat and capsid proteins)
e3zifJ1 J:7-597 jelly-roll Nucleoplasmin-like/VP (viral coat and capsid proteins) Nucleoplasmin-like/VP (viral coat and capsid proteins)
e3zifJ2 J:588-910 jelly-roll Nucleoplasmin-like/VP (viral coat and capsid proteins) Nucleoplasmin-like/VP (viral coat and capsid proteins)
e3zifK1 K:7-597 jelly-roll Nucleoplasmin-like/VP (viral coat and capsid proteins) Nucleoplasmin-like/VP (viral coat and capsid proteins)
e3zifK2 K:588-909 jelly-roll Nucleoplasmin-like/VP (viral coat and capsid proteins) Nucleoplasmin-like/VP (viral coat and capsid proteins)
e3zifL1 L:7-597 jelly-roll Nucleoplasmin-like/VP (viral coat and capsid proteins) Nucleoplasmin-like/VP (viral coat and capsid proteins)
e3zifL2 L:588-909 jelly-roll Nucleoplasmin-like/VP (viral coat and capsid proteins) Nucleoplasmin-like/VP (viral coat and capsid proteins)
e3zifM1 M:31-134,M:345-480 jelly-roll Jelly-roll domain in Adenovirus penton base protein Jelly-roll domain in Adenovirus penton base protein
e3zifM2 M:128-344 Insertion domain in Adenovirus penton base protein Insertion domain in Adenovirus penton base protein Insertion domain in Adenovirus penton base protein

Structural contacts of domain e3zifM1 of H-group "Jelly-roll domain in Adenovirus penton base protein":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e3zifA1 M:X,Y,Z->A:x,y,z Nucleoplasmin-like/VP (viral coat and capsid proteins) Interaction Interface Pymol
e3zifA2 M:X,Y,Z->A:x,y,z Nucleoplasmin-like/VP (viral coat and capsid proteins) Interaction Interface Pymol