| UID: | 000222341 |
|---|---|
| Type: | Automatic domain |
| Parent: | e2zeqA1 |
| Range: | F:2-106 |
| Ligands: | CL |
| PDB: | 3zkj |
| PDB Description: | TRANSCRIPTION ELONGATION FACTOR B POLYPEPTIDE 2 |
| UniProt: | Q15370 |
| Hsap BLAST neighbor: | Q15370 |
| Species: | Homo sapiens |
Structure of domain e3zkjF1
Domains in the same chain:
| e3zkjF1 | F:2-106 | beta-Grasp | Ubiquitin-related | Ubiquitin-like |
Domains in the same PDB:
| e3zkjA2 | A:37-255 | Repetitive alpha hairpins | Ankyrin repeat | Ankyrin repeat |
| e3zkjA1 | A:255-294 | SOCS box-like | SOCS box-like | SOCS box-like |
| e3zkjB1 | B:18-112 | POZ domain | POZ domain | POZ domain |
| e3zkjC1 | C:2-105 | beta-Grasp | Ubiquitin-related | Ubiquitin-like |
| e3zkjD1 | D:36-255 | Repetitive alpha hairpins | Ankyrin repeat | Ankyrin repeat |
| e3zkjD2 | D:255-294 | SOCS box-like | SOCS box-like | SOCS box-like |
| e3zkjE2 | E:18-112 | POZ domain | POZ domain | POZ domain |
| e3zkjF1 | F:2-106 | beta-Grasp | Ubiquitin-related | Ubiquitin-like |
Structural contacts of domain e3zkjF1 of H-group "Ubiquitin-related":
The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.
| Domain ID | Symmetry operator | H-group | Visualization |
|---|---|---|---|
| e3zkjE2 | F:x,y,z->E:X,Y,Z | POZ domain | Interaction Interface Pymol |
| e3zkjC1 | F:X,Y-1,Z->C:x,y,z | Ubiquitin-related | Interaction Interface Pymol |
| e3zkjB1 | F:X,Y-1,Z->B:x,y,z | POZ domain | Interaction Interface Pymol |
| e3zkjD2 | F:x,y,z->D:X,Y,Z | SOCS box-like | Interaction Interface Pymol |
| e3zkjA1 | F:X,Y-1,Z->A:x,y,z | SOCS box-like | Interaction Interface Pymol |
