Domain ID e3zkmD1

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  • A: beta sandwiches
  • X: Immunoglobulin-like beta-sandwich
  • H: Immunoglobulin-related
  • T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like
  • F: V-set
UID: 001007373
Type: Automatic domain
Parent: e1mjuL1
Range: D:1-111
PDB: 3zkm
PDB Description: FAB LIGHT CHAIN
Hsap BLAST neighbor: P06312
Species: Mus musculus

Structure of domain e3zkmD1

Domains in the same chain:

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e3zkmD1 D:1-111 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3zkmD2 D:112-217 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like

Domains in the same PDB:

e3zkmA3 A:14-196 cradle loop barrel RIFT-related acid protease
e3zkmA2 A:197-397 cradle loop barrel RIFT-related acid protease
e3zkmB3 B:14-196 cradle loop barrel RIFT-related acid protease
e3zkmB2 B:197-397 cradle loop barrel RIFT-related acid protease
e3zkmC1 C:1-116 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3zkmC2 C:117-217 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3zkmD1 D:1-111 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3zkmD2 D:112-217 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3zkmH1 H:1-116 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3zkmH2 H:117-217 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3zkmL1 L:1-111 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3zkmL2 L:112-217 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like

Structural contacts of domain e3zkmD1 of H-group "Immunoglobulin-related":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e3zkmC1 D:x,y,z->C:X,Y,Z Immunoglobulin-related Interaction Interface Pymol
e3zkmB2 D:x,y,z->B:X,Y,Z RIFT-related Interaction Interface Pymol
e3zkmB3 D:X-1,Y,Z->B:x,y,z RIFT-related Interaction Interface Pymol
e3zkmA3 D:X-1/2,-Y+1/2,-Z+1->A:x,y,z RIFT-related Interaction Interface Pymol
e3zkmC2 D:x,y,z->C:X-1,Y,Z Immunoglobulin-related Interaction Interface Pymol