Domain ID e3zknA2

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  • A: beta barrels
  • X: cradle loop barrel
  • H: RIFT-related
  • T: acid protease
  • F: Asp
UID: 001249460
Type: Automatic domain
Parent: e1dpjA3
Range: A:197-397
Ligands: DMS SO4 WZV
PDB: 3zkn
PDB Description: BETA-SECRETASE 2
UniProt: Q9Y5Z0
Hsap BLAST neighbor: Q9Y5Z0
Species: Homo sapiens

Structure of domain e3zknA2

Domains in the same chain:

Download Pymol

e3zknA3 A:14-196 cradle loop barrel RIFT-related acid protease
e3zknA2 A:197-397 cradle loop barrel RIFT-related acid protease

Domains in the same PDB:

e3zknA3 A:14-196 cradle loop barrel RIFT-related acid protease
e3zknA2 A:197-397 cradle loop barrel RIFT-related acid protease
e3zknB3 B:14-196 cradle loop barrel RIFT-related acid protease
e3zknB2 B:197-397 cradle loop barrel RIFT-related acid protease
e3zknC1 C:1-116 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3zknC2 C:117-217 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3zknD1 D:1-111 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3zknD2 D:112-217 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3zknH1 H:1-116 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3zknH2 H:117-217 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3zknL1 L:1-111 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3zknL2 L:112-217 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like

Structural contacts of domain e3zknA2 of H-group "RIFT-related":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e3zknB2 A:-X+1,Y-1/2,-Z+1->B:x,y,z RIFT-related Interaction Interface Pymol
e3zknC1 A:-X+1,Y-1/2,-Z+1->C:x,y,z Immunoglobulin-related Interaction Interface Pymol