ECOD: domain e3zniD1

Domain ID e3zniD1

A: a+b two layers
X: beta-Grasp
H: Ubiquitin-related
T: Ubiquitin-like
F: ubiquitin

UID:	001065798
Type:	Automatic domain
Parent:	e1ogwA1
Range:	D:0-76
PDB:	3zni
PDB Description:	POLYUBIQUITIN-C
UniProt:	P0CG48
Hsap BLAST neighbor:	P62979
Species:	Homo sapiens

Domain
In chain context
In PDB context

Structure of domain e3zniD1

Domains in the same chain:

Download Pymol

e3zniD1	D:0-76	beta-Grasp	Ubiquitin-related	Ubiquitin-like

Domains in the same PDB:

e3zniA5	A:38-170	N-cbl like	N-terminal domain of cbl (N-cbl)	N-terminal domain of cbl (N-cbl)
e3zniA7	A:171-255	EF-hand	EF-hand-related	EF-hand
e3zniA6	A:256-345	SH2	SH2	SH2
e3zniA8	A:346-427	RING/U-box-like	RING/U-box-like	RING/U-box
e3zniC1	C:2-147	UBC-like	UBC-like	UBC-like
e3zniD1	D:0-76	beta-Grasp	Ubiquitin-related	Ubiquitin-like
e3zniE5	E:38-170	N-cbl like	N-terminal domain of cbl (N-cbl)	N-terminal domain of cbl (N-cbl)
e3zniE7	E:171-255	EF-hand	EF-hand-related	EF-hand
e3zniE6	E:256-345	SH2	SH2	SH2
e3zniE8	E:346-427	RING/U-box-like	RING/U-box-like	RING/U-box
e3zniG1	G:2-147	UBC-like	UBC-like	UBC-like
e3zniH1	H:0-76	beta-Grasp	Ubiquitin-related	Ubiquitin-like
e3zniI5	I:41-170	N-cbl like	N-terminal domain of cbl (N-cbl)	N-terminal domain of cbl (N-cbl)
e3zniI7	I:171-255	EF-hand	EF-hand-related	EF-hand
e3zniI6	I:256-345	SH2	SH2	SH2
e3zniI8	I:346-426	RING/U-box-like	RING/U-box-like	RING/U-box
e3zniK1	K:2-147	UBC-like	UBC-like	UBC-like
e3zniL1	L:0-76	beta-Grasp	Ubiquitin-related	Ubiquitin-like
e3zniM2	M:38-169	N-cbl like	N-terminal domain of cbl (N-cbl)	N-terminal domain of cbl (N-cbl)
e3zniM1	M:170-255	EF-hand	EF-hand-related	EF-hand
e3zniM3	M:256-346	SH2	SH2	SH2
e3zniM4	M:347-427	RING/U-box-like	RING/U-box-like	RING/U-box
e3zniO1	O:2-147	UBC-like	UBC-like	UBC-like
e3zniP1	P:0-76	beta-Grasp	Ubiquitin-related	Ubiquitin-like

Structural contacts of domain e3zniD1 of H-group "Ubiquitin-related":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e3zniC1	D:x,y,z->C:X,Y,Z	UBC-like	Interaction Interface Pymol
e3zniA8	D:x,y,z->A:X,Y,Z	RING/U-box-like	Interaction Interface Pymol
e3zniA6	D:-X,Y-1/2,-Z->A:x,y,z	SH2	Interaction Interface Pymol