ECOD: domain e3ztdG2

Domain ID e3ztdG2

A: a+b two layers
X: beta-Grasp
H: Ubiquitin-related
T: Ubiquitin-like
F: ubiquitin

UID:	001210499
Type:	Automatic domain
Parent:	e2zeqA1
Range:	G:1-102
PDB:	3ztd
PDB Description:	TRANSCRIPTION ELONGATION FACTOR B POLYPEPTIDE 2
UniProt:	Q15370
Hsap BLAST neighbor:	Q15370
Species:	Homo sapiens

Domain
In chain context
In PDB context

Structure of domain e3ztdG2

Domains in the same chain:

Download Pymol

e3ztdG2	G:1-102	beta-Grasp	Ubiquitin-related	Ubiquitin-like

Domains in the same PDB:

e3ztdA2	A:1-103	beta-Grasp	Ubiquitin-related	Ubiquitin-like
e3ztdB2	B:17-112	POZ domain	POZ domain	POZ domain
e3ztdC4	C:63-154	Immunoglobulin-like beta-sandwich	Immunoglobulin-related	Prealbumin-like
e3ztdC3	C:155-204	SOCS box-like	SOCS box-like	SOCS box-like
e3ztdD2	D:1-102	beta-Grasp	Ubiquitin-related	Ubiquitin-like
e3ztdE2	E:17-112	POZ domain	POZ domain	POZ domain
e3ztdF4	F:63-154	Immunoglobulin-like beta-sandwich	Immunoglobulin-related	Prealbumin-like
e3ztdF3	F:155-204	SOCS box-like	SOCS box-like	SOCS box-like
e3ztdG2	G:1-102	beta-Grasp	Ubiquitin-related	Ubiquitin-like
e3ztdH2	H:17-112	POZ domain	POZ domain	POZ domain
e3ztdI4	I:63-154	Immunoglobulin-like beta-sandwich	Immunoglobulin-related	Prealbumin-like
e3ztdI3	I:155-204	SOCS box-like	SOCS box-like	SOCS box-like
e3ztdJ2	J:1-104	beta-Grasp	Ubiquitin-related	Ubiquitin-like
e3ztdK2	K:17-112	POZ domain	POZ domain	POZ domain
e3ztdL4	L:63-154	Immunoglobulin-like beta-sandwich	Immunoglobulin-related	Prealbumin-like
e3ztdL3	L:155-204	SOCS box-like	SOCS box-like	SOCS box-like

Structural contacts of domain e3ztdG2 of H-group "Ubiquitin-related":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e3ztdH2	G:X,Y,Z->H:x,y,z	POZ domain	Interaction Interface Pymol
e3ztdG2	G:x,y,z->G:Y,X,-Z-1/4	Ubiquitin-related	Interaction Interface Pymol
e3ztdG2	G:Y,X,-Z-1/4->G:x,y,z	Ubiquitin-related	Interaction Interface Pymol
e3ztdJ2	G:Y-1,X,-Z-1/4->J:x,y,z	Ubiquitin-related	Interaction Interface Pymol