ECOD: domain e3zyjB1

Domain ID e3zyjB1

A: few secondary structure elements
X: EGF-like
H: EGF-related
T: EGF/Laminin
F: Laminin_EGF

UID:	001003729
Type:	Automatic domain
Parent:	e1kloA2
Range:	B:307-369
Ligands:	NAG
PDB:	3zyj
PDB Description:	NETRIN-G1
UniProt:	Q9Y2I2
Hsap BLAST neighbor:	Q9Y2I2
Species:	Homo sapiens

Domain
In chain context
In PDB context

Structure of domain e3zyjB1

Domains in the same chain:

Download Pymol

e3zyjB4	B:30-309	jelly-roll	Concanavalin A-like	Galactose-binding domain-like
e3zyjB1	B:307-369	EGF-like	EGF-related	EGF/Laminin

Domains in the same PDB:

e3zyjA2	A:45-347	Single-stranded right-handed beta-helix	Leucine-rich repeats	Leucine-rich repeats
e3zyjA3	A:355-444	Immunoglobulin-like beta-sandwich	Immunoglobulin-related	Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3zyjB4	B:30-309	jelly-roll	Concanavalin A-like	Galactose-binding domain-like
e3zyjB1	B:307-369	EGF-like	EGF-related	EGF/Laminin
e3zyjC2	C:45-349	Single-stranded right-handed beta-helix	Leucine-rich repeats	Leucine-rich repeats
e3zyjC1	C:355-444	Immunoglobulin-like beta-sandwich	Immunoglobulin-related	Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3zyjD4	D:30-306	jelly-roll	Concanavalin A-like	Galactose-binding domain-like
e3zyjD3	D:307-369	EGF-like	EGF-related	EGF/Laminin

Structural contacts of domain e3zyjB1 of H-group "EGF-related":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e3zyjD3	B:-X,Y,-Z->D:x,y,z	EGF-related	Interaction Interface Pymol
e3zyjD4	B:-X,Y,-Z->D:x,y,z	Concanavalin A-like	Interaction Interface Pymol