ECOD: domain e3zyyY1

Domain ID e3zyyY1

A: mixed a+b and a/b
X: Ribonuclease H-like
H: Ribonuclease H-like
T: Ribonuclease H-like
F: RACo_C_ter

UID:	001117505
Type:	Automatic domain
Parent:	e3zyyX4
Range:	Y:370-629
Ligands:	BU3 PO4 SO4
PDB:	3zyy
PDB Description:	IRON-SULFUR CLUSTER BINDING PROTEIN
UniProt:	Q3ACS2
Species:	Carboxydothermus hydrogenoformans

Domain
In chain context
In PDB context

Structure of domain e3zyyY1

Domains in the same chain:

Download Pymol

e3zyyY3	Y:108-203	Ribosomal protein L31e-like	Reductive activator for corrinoid/iron-sulfur protein second domain	Reductive activator for corrinoid/iron-sulfur protein second domain
e3zyyY2	Y:204-369	Ribonuclease H-like	Ribonuclease H-like	Ribonuclease H-like
e3zyyY1	Y:370-629	Ribonuclease H-like	Ribonuclease H-like	Ribonuclease H-like

Domains in the same PDB:

e3zyyX1	X:3-117	beta-Grasp	Ubiquitin-related	Ubiquitin-like
e3zyyX2	X:118-203	Ribosomal protein L31e-like	Reductive activator for corrinoid/iron-sulfur protein second domain	Reductive activator for corrinoid/iron-sulfur protein second domain
e3zyyX3	X:204-369	Ribonuclease H-like	Ribonuclease H-like	Ribonuclease H-like
e3zyyX4	X:370-630	Ribonuclease H-like	Ribonuclease H-like	Ribonuclease H-like
e3zyyY3	Y:108-203	Ribosomal protein L31e-like	Reductive activator for corrinoid/iron-sulfur protein second domain	Reductive activator for corrinoid/iron-sulfur protein second domain
e3zyyY2	Y:204-369	Ribonuclease H-like	Ribonuclease H-like	Ribonuclease H-like
e3zyyY1	Y:370-629	Ribonuclease H-like	Ribonuclease H-like	Ribonuclease H-like

Structural contacts of domain e3zyyY1 of H-group "Ribonuclease H-like":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e3zyyX4	Y:x,y,z->X:-X,Y-1/2,-Z-1/2	Ribonuclease H-like	Interaction Interface Pymol
e3zyyY2	Y:x,y,z->Y:X-1/2,-Y+1/2,-Z-1	Ribonuclease H-like	Interaction Interface Pymol
e3zyyY2	Y:X-1/2,-Y+1/2,-Z-1->Y:x,y,z	Ribonuclease H-like	Interaction Interface Pymol
e3zyyX1	Y:x,y,z->X:-X+1/2,-Y,Z-1/2	Ubiquitin-related	Interaction Interface Pymol