Domain ID e4a2qB3

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  • A: alpha bundles
  • X: Helical bundle insertion in helicase domains
  • H: Helical bundle in Hef helicase
  • T: Helical bundle in Hef helicase
  • F: RIG-I_C
UID: 001812157
Type: Automatic domain
Parent: e4a2wA5
Range: B:468-607
PDB: 4a2q
PDB Description: RETINOIC ACID INDUCIBLE PROTEIN I
UniProt: D3TI84
Hsap BLAST neighbor: O95786
Species: Anas platyrhynchos

Structure of domain e4a2qB3

Domains in the same chain:

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e4a2qB4 B:2-97 DEATH domain DEATH domain DEATH domain
e4a2qB5 B:98-186 DEATH domain DEATH domain DEATH domain
e4a2qB1 B:245-455 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e4a2qB3 B:468-607 Helical bundle insertion in helicase domains Helical bundle in Hef helicase Helical bundle in Hef helicase
e4a2qB2 B:608-662,B:691-792 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases

Domains in the same PDB:

e4a2qA4 A:2-97 DEATH domain DEATH domain DEATH domain
e4a2qA5 A:98-186 DEATH domain DEATH domain DEATH domain
e4a2qA1 A:245-455 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e4a2qA3 A:468-607 Helical bundle insertion in helicase domains Helical bundle in Hef helicase Helical bundle in Hef helicase
e4a2qA2 A:608-662,A:691-791 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e4a2qB4 B:2-97 DEATH domain DEATH domain DEATH domain
e4a2qB5 B:98-186 DEATH domain DEATH domain DEATH domain
e4a2qB1 B:245-455 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e4a2qB3 B:468-607 Helical bundle insertion in helicase domains Helical bundle in Hef helicase Helical bundle in Hef helicase
e4a2qB2 B:608-662,B:691-792 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e4a2qD4 D:2-97 DEATH domain DEATH domain DEATH domain
e4a2qD5 D:98-186 DEATH domain DEATH domain DEATH domain
e4a2qD1 D:245-455 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e4a2qD3 D:468-607 Helical bundle insertion in helicase domains Helical bundle in Hef helicase Helical bundle in Hef helicase
e4a2qD2 D:608-662,D:691-791 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e4a2qE4 E:2-97 DEATH domain DEATH domain DEATH domain
e4a2qE5 E:98-186 DEATH domain DEATH domain DEATH domain
e4a2qE1 E:245-455 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e4a2qE3 E:468-607 Helical bundle insertion in helicase domains Helical bundle in Hef helicase Helical bundle in Hef helicase
e4a2qE2 E:608-662,E:691-791 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases

Structural contacts of domain e4a2qB3 of H-group "Helical bundle in Hef helicase":

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The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e4a2qA4 B:x,y,z->A:X,Y,Z DEATH domain Interaction Interface Pymol
e4a2qA3 B:x,y,z->A:X,Y,Z Helical bundle in Hef helicase Interaction Interface Pymol
e4a2qA5 B:x,y,z->A:X,Y,Z DEATH domain Interaction Interface Pymol
e4a2qA2 B:-X-1/2,Y-1/2,-Z+1->A:x,y,z P-loop domains-related Interaction Interface Pymol
e4a2qA1 B:-X-1/2,Y-1/2,-Z+1->A:x,y,z P-loop domains-related Interaction Interface Pymol