ECOD: domain e4a2wB4

Domain ID e4a2wB4

A: alpha bundles
X: Helical bundle insertion in helicase domains
H: Helical bundle in Hef helicase
T: Helical bundle in Hef helicase
F: RIG-I_C

UID:	001812172
Type:	Automatic domain
Parent:	e4a2wA5
Range:	B:468-607
PDB:	4a2w
PDB Description:	RETINOIC ACID INDUCIBLE PROTEIN I
UniProt:	D3TI84
Hsap BLAST neighbor:	O95786
Species:	Anas platyrhynchos

Domain
In chain context
In PDB context

Structure of domain e4a2wB4

Domains in the same chain:

Download Pymol

Domains in the same PDB:

e4a2wA1	A:1-97	DEATH domain	DEATH domain	DEATH domain
e4a2wA2	A:98-186	DEATH domain	DEATH domain	DEATH domain
e4a2wA3	A:245-455	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e4a2wA4	A:456-467,A:608-794	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e4a2wA5	A:468-607	Helical bundle insertion in helicase domains	Helical bundle in Hef helicase	Helical bundle in Hef helicase
e4a2wB5	B:1-97	DEATH domain	DEATH domain	DEATH domain
e4a2wB6	B:98-186	DEATH domain	DEATH domain	DEATH domain
e4a2wB1	B:245-455	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e4a2wB4	B:468-607	Helical bundle insertion in helicase domains	Helical bundle in Hef helicase	Helical bundle in Hef helicase
e4a2wB3	B:608-662,B:691-794	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases

Structural contacts of domain e4a2wB4 of H-group "Helical bundle in Hef helicase":

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The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e4a2wA1	B:x,y,z->A:X,Y,Z	DEATH domain	Interaction Interface Pymol
e4a2wA2	B:x,y,z->A:X,Y,Z	DEATH domain	Interaction Interface Pymol
e4a2wA5	B:x,y,z->A:X,Y,Z	Helical bundle in Hef helicase	Interaction Interface Pymol
e4a2wA3	B:x,y,z->A:-Y+1/2,X-1/2,Z+1/4	P-loop domains-related	Interaction Interface Pymol
e4a2wB4	B:x,y,z->B:Y,X,-Z	Helical bundle in Hef helicase	Interaction Interface Pymol
e4a2wB4	B:Y,X,-Z->B:x,y,z	Helical bundle in Hef helicase	Interaction Interface Pymol