| UID: | 001159228 |
|---|---|
| Type: | Automatic and representative domain |
| Parent: | e2gj8A1 |
| Range: | B:2-291 |
| PDB: | 4a9a |
| PDB Description: | RIBOSOME-INTERACTING GTPASE 1 |
| UniProt: | P39729 |
| Hsap BLAST neighbor: | Q9Y295 |
| Species: | Saccharomyces cerevisiae |
Structure of domain e4a9aB3
Domains in the same chain:
| e4a9aB3 | B:2-291 | P-loop domains-like | P-loop domains-related | P-loop containing nucleoside triphosphate hydrolases |
| e4a9aB4 | B:292-369 | beta-Grasp | Ubiquitin-related | Ubiquitin-like |
Domains in the same PDB:
Structural contacts of domain e4a9aB3 of H-group "P-loop domains-related":
The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.
| Domain ID | Symmetry operator | H-group | Visualization |
|---|---|---|---|
| e4a9aD2 | B:X,Y,Z->D:x,y,z | Translation machinery-associated protein 46 DFRP domain | Interaction Interface Pymol |
| e4a9aA8 | B:x,y,z->A:X,Y,Z | Ubiquitin-related | Interaction Interface Pymol |
| e4a9aA7 | B:x,y,z->A:X,Y,Z | P-loop domains-related | Interaction Interface Pymol |
| e4a9aA7 | B:x,y,z->A:X,Y,Z-1 | P-loop domains-related | Interaction Interface Pymol |
| e4a9aC1 | B:X,Y,Z->C:x,y,z | Translation machinery-associated protein 46 DFRP domain | Interaction Interface Pymol |
| e4a9aB3 | B:x,y,z->B:-X+2,-Y,Z | P-loop domains-related | Interaction Interface Pymol |
| e4a9aB3 | B:-X+2,-Y,Z->B:x,y,z | P-loop domains-related | Interaction Interface Pymol |
| e4a9aA7 | B:x,y,z->A:-X+2,-Y,Z | P-loop domains-related | Interaction Interface Pymol |
