Domain ID e4ac9B10

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  • A: a/b three-layered sandwiches
  • X: P-loop domains-like
  • H: P-loop domains-related
  • T: P-loop containing nucleoside triphosphate hydrolases
  • F: GTP_EFTU
UID: 001160385
Type: Automatic domain
Parent: e2c78A3
Range: B:1-176
Ligands: 5GP DXC GDP MG SO4
PDB: 4ac9
PDB Description: MJ0495-LIKE PROTEIN
UniProt: Q8J307
Hsap BLAST neighbor: P57772
Species: Methanococcus maripaludis

Structure of domain e4ac9B10

Domains in the same chain:

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e4ac9B10 B:1-176 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e4ac9B8 B:177-271 cradle loop barrel RIFT-related Alanine racemase-C
e4ac9B2 B:272-387 cradle loop barrel RIFT-related Aminomethyltransferase beta-barrel domain
e4ac9B4 B:388-468 cradle loop barrel RIFT-related Alanine racemase-C

Domains in the same PDB:

e4ac9A1 A:1-28,A:50-179 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e4ac9A9 A:180-271 cradle loop barrel RIFT-related Alanine racemase-C
e4ac9A2 A:272-387 cradle loop barrel RIFT-related Aminomethyltransferase beta-barrel domain
e4ac9A4 A:388-468 cradle loop barrel RIFT-related Alanine racemase-C
e4ac9B10 B:1-176 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e4ac9B8 B:177-271 cradle loop barrel RIFT-related Alanine racemase-C
e4ac9B2 B:272-387 cradle loop barrel RIFT-related Aminomethyltransferase beta-barrel domain
e4ac9B4 B:388-468 cradle loop barrel RIFT-related Alanine racemase-C
e4ac9C1 C:1-179 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e4ac9C2 C:180-271 cradle loop barrel RIFT-related Alanine racemase-C
e4ac9C3 C:272-387 cradle loop barrel RIFT-related Aminomethyltransferase beta-barrel domain
e4ac9C4 C:388-468 cradle loop barrel RIFT-related Alanine racemase-C
e4ac9D13 D:2-176 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e4ac9D11 D:177-271 cradle loop barrel RIFT-related Alanine racemase-C
e4ac9D2 D:272-387 cradle loop barrel RIFT-related Aminomethyltransferase beta-barrel domain
e4ac9D4 D:388-468 cradle loop barrel RIFT-related Alanine racemase-C

Structural contacts of domain e4ac9B10 of H-group "P-loop domains-related":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e4ac9D2 B:X,Y,Z->D:x,y,z RIFT-related Interaction Interface Pymol
e4ac9D13 B:X,Y,Z->D:x,y,z P-loop domains-related Interaction Interface Pymol
e4ac9C2 B:X,X-Y-1,-Z->C:x,y,z RIFT-related Interaction Interface Pymol
e4ac9C1 B:X,X-Y-1,-Z->C:x,y,z P-loop domains-related Interaction Interface Pymol
e4ac9A4 B:x,y,z->A:-Y,X-Y,Z+1/3 RIFT-related Interaction Interface Pymol
e4ac9A9 B:x,y,z->A:X,Y,Z RIFT-related Interaction Interface Pymol
e4ac9A1 B:x,y,z->A:-Y,-X,-Z-1/3 P-loop domains-related Interaction Interface Pymol