Domain ID e4aidA4

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  • A: a+b two layers
  • X: Ribonuclease PH domain 2-like
  • H: Ribonuclease PH domain 2
  • T: Ribonuclease PH domain 2
  • F: RNase_PH_C
UID: 000149451
Type: Automatic domain
Parent: e2je6B1
Range: A:145-237
PDB: 4aid
PDB Description: POLYRIBONUCLEOTIDE NUCLEOTIDYLTRANSFERASE
UniProt: Q9AC32
Hsap BLAST neighbor: Q8TCS8
Species:

Structure of domain e4aidA4

Domains in the same chain:

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e4aidA8 A:-2-144 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e4aidA4 A:145-237 Ribonuclease PH domain 2-like Ribonuclease PH domain 2 Ribonuclease PH domain 2
e4aidA9 A:238-324 HTH Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3
e4aidA6 A:325-460 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e4aidA7 A:461-556,A:600-613 Ribonuclease PH domain 2-like Ribonuclease PH domain 2 Ribonuclease PH domain 2

Domains in the same PDB:

e4aidA8 A:-2-144 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e4aidA4 A:145-237 Ribonuclease PH domain 2-like Ribonuclease PH domain 2 Ribonuclease PH domain 2
e4aidA9 A:238-324 HTH Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3
e4aidA6 A:325-460 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e4aidA7 A:461-556,A:600-613 Ribonuclease PH domain 2-like Ribonuclease PH domain 2 Ribonuclease PH domain 2
e4aidB13 B:-1-144 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e4aidB15 B:141-226 Ribonuclease PH domain 2-like Ribonuclease PH domain 2 Ribonuclease PH domain 2
e4aidB14 B:227-326 HTH Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3
e4aidB11 B:326-460 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e4aidB12 B:461-556 Ribonuclease PH domain 2-like Ribonuclease PH domain 2 Ribonuclease PH domain 2
e4aidC6 C:-1-144 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e4aidC5 C:141-226 Ribonuclease PH domain 2-like Ribonuclease PH domain 2 Ribonuclease PH domain 2
e4aidC1 C:227-326 HTH Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3
e4aidC3 C:326-460 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e4aidC4 C:461-548 Ribonuclease PH domain 2-like Ribonuclease PH domain 2 Ribonuclease PH domain 2

Structural contacts of domain e4aidA4 of H-group "Ribonuclease PH domain 2":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e4aidB14 A:x,y,z->B:-X+Y-1/3,-X+1/3,Z+1/3 Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 Interaction Interface Pymol
e4aidB15 A:X,Y,Z->B:x,y,z Ribonuclease PH domain 2 Interaction Interface Pymol