Domain ID e4aimA13

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  • A: a+b two layers
  • X: Ribosomal protein S5 domain 2-like
  • H: Ribosomal protein S5 domain 2-like
  • T: Ribosomal protein S5 domain 2-like
  • F: RNase_PH
UID: 001208155
Type: Automatic domain
Parent: e1e3hA6
Range: A:326-460
Ligands: PO4
PDB: 4aim
PDB Description: POLYRIBONUCLEOTIDE NUCLEOTIDYLTRANSFERASE
UniProt: Q9AC32
Hsap BLAST neighbor: Q8TCS8
Species:

Structure of domain e4aimA13

Domains in the same chain:

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e4aimA16 A:-1-144 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e4aimA18 A:141-226 Ribonuclease PH domain 2-like Ribonuclease PH domain 2 Ribonuclease PH domain 2
e4aimA17 A:227-326 HTH Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3
e4aimA13 A:326-460 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e4aimA14 A:461-548 Ribonuclease PH domain 2-like Ribonuclease PH domain 2 Ribonuclease PH domain 2
e4aimA19 A:549-618 Alpha-lytic protease prodomain-like KH-domains Eukaryotic type KH-domain (KH-domain type I)
e4aimA15 A:619-696 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins

Domains in the same PDB:

e4aimA16 A:-1-144 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e4aimA18 A:141-226 Ribonuclease PH domain 2-like Ribonuclease PH domain 2 Ribonuclease PH domain 2
e4aimA17 A:227-326 HTH Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3
e4aimA13 A:326-460 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e4aimA14 A:461-548 Ribonuclease PH domain 2-like Ribonuclease PH domain 2 Ribonuclease PH domain 2
e4aimA19 A:549-618 Alpha-lytic protease prodomain-like KH-domains Eukaryotic type KH-domain (KH-domain type I)
e4aimA15 A:619-696 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins

Structural contacts of domain e4aimA13 of H-group "Ribosomal protein S5 domain 2-like":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e4aimA16 A:x,y,z->A:-Y,X-Y,Z Ribosomal protein S5 domain 2-like Interaction Interface Pymol