Domain ID e4amwA1

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  • A: a/b barrels
  • X: TIM beta/alpha-barrel
  • H: TIM barrels
  • T: TIM barrels
  • F: Glyco_hydro_31_2nd
UID: 001594266
Type: Automatic domain
Parent: e2g3mF2
Range: A:333-784
Ligands: B9D GOL
PDB: 4amw
PDB Description: ALPHA-1,4-GLUCAN LYASE ISOZYME 1
UniProt: Q9STC1
Hsap BLAST neighbor: Q14697
Species: Gracilariopsis lemaneiformis

Structure of domain e4amwA1

Domains in the same chain:

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e4amwA2 A:14-332 Glycosyl hydrolase domain-like supersandwich supersandwich
e4amwA1 A:333-784 TIM beta/alpha-barrel TIM barrels TIM barrels
e4amwA3 A:785-878 Glycosyl hydrolase domain-like Glycosyl hydrolase domain Glycosyl hydrolase domain
e4amwA4 A:879-1038 Putative glucosidase YicI, C-terminal domain Putative glucosidase YicI, C-terminal domain Putative glucosidase YicI, C-terminal domain

Domains in the same PDB:

e4amwA2 A:14-332 Glycosyl hydrolase domain-like supersandwich supersandwich
e4amwA1 A:333-784 TIM beta/alpha-barrel TIM barrels TIM barrels
e4amwA3 A:785-878 Glycosyl hydrolase domain-like Glycosyl hydrolase domain Glycosyl hydrolase domain
e4amwA4 A:879-1038 Putative glucosidase YicI, C-terminal domain Putative glucosidase YicI, C-terminal domain Putative glucosidase YicI, C-terminal domain
e4amwB2 B:14-332 Glycosyl hydrolase domain-like supersandwich supersandwich
e4amwB1 B:333-784 TIM beta/alpha-barrel TIM barrels TIM barrels
e4amwB3 B:785-878 Glycosyl hydrolase domain-like Glycosyl hydrolase domain Glycosyl hydrolase domain
e4amwB4 B:879-1038 Putative glucosidase YicI, C-terminal domain Putative glucosidase YicI, C-terminal domain Putative glucosidase YicI, C-terminal domain
e4amwC2 C:14-333 Glycosyl hydrolase domain-like supersandwich supersandwich
e4amwC1 C:334-784 TIM beta/alpha-barrel TIM barrels TIM barrels
e4amwC3 C:785-878 Glycosyl hydrolase domain-like Glycosyl hydrolase domain Glycosyl hydrolase domain
e4amwC4 C:879-1038 Putative glucosidase YicI, C-terminal domain Putative glucosidase YicI, C-terminal domain Putative glucosidase YicI, C-terminal domain
e4amwD2 D:14-332 Glycosyl hydrolase domain-like supersandwich supersandwich
e4amwD1 D:333-784 TIM beta/alpha-barrel TIM barrels TIM barrels
e4amwD3 D:785-878 Glycosyl hydrolase domain-like Glycosyl hydrolase domain Glycosyl hydrolase domain
e4amwD4 D:879-1038 Putative glucosidase YicI, C-terminal domain Putative glucosidase YicI, C-terminal domain Putative glucosidase YicI, C-terminal domain

Structural contacts of domain e4amwA1 of H-group "TIM barrels":

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The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e4amwC4 A:X,Y,Z->C:x,y,z Putative glucosidase YicI, C-terminal domain Interaction Interface Pymol
e4amwC1 A:X,Y,Z->C:x,y,z TIM barrels Interaction Interface Pymol
e4amwD2 A:x,y,z->D:X,Y-1,Z supersandwich Interaction Interface Pymol
e4amwB2 A:x,y,z->B:X,Y,Z-1 supersandwich Interaction Interface Pymol
e4amwB3 A:x,y,z->B:X,Y,Z-1 Glycosyl hydrolase domain Interaction Interface Pymol
e4amwC1 A:x,y,z->C:X,Y-1,Z TIM barrels Interaction Interface Pymol
e4amwC4 A:x,y,z->C:X-1,Y,Z Putative glucosidase YicI, C-terminal domain Interaction Interface Pymol