Domain ID e4amxB1

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  • A: a/b barrels
  • X: TIM beta/alpha-barrel
  • H: TIM barrels
  • T: TIM barrels
  • F: Glyco_hydro_31_2nd
UID: 001668249
Type: Automatic domain
Parent: e2g3mF2
Range: B:333-784
Ligands: 5GF
PDB: 4amx
PDB Description: ALPHA-1,4-GLUCAN LYASE ISOZYME 1
UniProt: Q9STC1
Hsap BLAST neighbor: Q14697
Species: Gracilariopsis lemaneiformis

Structure of domain e4amxB1

Domains in the same chain:

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e4amxB2 B:14-332 Glycosyl hydrolase domain-like supersandwich supersandwich
e4amxB1 B:333-784 TIM beta/alpha-barrel TIM barrels TIM barrels
e4amxB3 B:785-878 Glycosyl hydrolase domain-like Glycosyl hydrolase domain Glycosyl hydrolase domain
e4amxB4 B:879-1038 Putative glucosidase YicI, C-terminal domain Putative glucosidase YicI, C-terminal domain Putative glucosidase YicI, C-terminal domain

Domains in the same PDB:

e4amxA2 A:14-332 Glycosyl hydrolase domain-like supersandwich supersandwich
e4amxA1 A:333-784 TIM beta/alpha-barrel TIM barrels TIM barrels
e4amxA3 A:785-878 Glycosyl hydrolase domain-like Glycosyl hydrolase domain Glycosyl hydrolase domain
e4amxA4 A:879-1038 Putative glucosidase YicI, C-terminal domain Putative glucosidase YicI, C-terminal domain Putative glucosidase YicI, C-terminal domain
e4amxB2 B:14-332 Glycosyl hydrolase domain-like supersandwich supersandwich
e4amxB1 B:333-784 TIM beta/alpha-barrel TIM barrels TIM barrels
e4amxB3 B:785-878 Glycosyl hydrolase domain-like Glycosyl hydrolase domain Glycosyl hydrolase domain
e4amxB4 B:879-1038 Putative glucosidase YicI, C-terminal domain Putative glucosidase YicI, C-terminal domain Putative glucosidase YicI, C-terminal domain
e4amxC2 C:14-332 Glycosyl hydrolase domain-like supersandwich supersandwich
e4amxC1 C:333-784 TIM beta/alpha-barrel TIM barrels TIM barrels
e4amxC3 C:785-878 Glycosyl hydrolase domain-like Glycosyl hydrolase domain Glycosyl hydrolase domain
e4amxC4 C:879-1038 Putative glucosidase YicI, C-terminal domain Putative glucosidase YicI, C-terminal domain Putative glucosidase YicI, C-terminal domain
e4amxD2 D:14-332 Glycosyl hydrolase domain-like supersandwich supersandwich
e4amxD1 D:333-784 TIM beta/alpha-barrel TIM barrels TIM barrels
e4amxD3 D:785-878 Glycosyl hydrolase domain-like Glycosyl hydrolase domain Glycosyl hydrolase domain
e4amxD4 D:879-1038 Putative glucosidase YicI, C-terminal domain Putative glucosidase YicI, C-terminal domain Putative glucosidase YicI, C-terminal domain

Structural contacts of domain e4amxB1 of H-group "TIM barrels":

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The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e4amxD1 B:x,y,z->D:X-1,Y,Z TIM barrels Interaction Interface Pymol
e4amxD4 B:x,y,z->D:X-1,Y,Z Putative glucosidase YicI, C-terminal domain Interaction Interface Pymol
e4amxC2 B:x,y,z->C:X-1,Y-1,Z+1 supersandwich Interaction Interface Pymol
e4amxC3 B:x,y,z->C:X-1,Y,Z+1 Glycosyl hydrolase domain Interaction Interface Pymol
e4amxA2 B:x,y,z->A:X,Y,Z supersandwich Interaction Interface Pymol