Domain ID e4apkA2

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  • A: mixed a+b and a/b
  • X: Zincin-like
  • H: GroEL-intermediate domain like
  • T: GroEL-intermediate domain like
  • F: Cpn60_TCP1
UID: 000979710
Type: Automatic domain
Parent: e1q3qA2
Range: A:3145-3210,A:3367-3402
Ligands: ADP BEF MG
PDB: 4apk
PDB Description:
Hsap BLAST neighbor: P17987
Species:

Structure of domain e4apkA2

Domains in the same chain:

Download Pymol

e4apkA1 A:3001-3143,A:3403-3537 GroEL equatorial domain-like GroEL equatorial domain-like GroEL equatorial domain-like
e4apkA2 A:3145-3210,A:3367-3402 Zincin-like GroEL-intermediate domain like GroEL-intermediate domain like
e4apkA3 A:3211-3366 The "swivelling" beta/beta/alpha domains The "swivelling" beta/beta/alpha domain The "swivelling" beta/beta/alpha domain

Domains in the same PDB:

e4apka1 a:4001-4143,a:4403-4537 GroEL equatorial domain-like GroEL equatorial domain-like GroEL equatorial domain-like
e4apka2 a:4145-4210,a:4367-4402 Zincin-like GroEL-intermediate domain like GroEL-intermediate domain like
e4apka3 a:4211-4366 The "swivelling" beta/beta/alpha domains The "swivelling" beta/beta/alpha domain The "swivelling" beta/beta/alpha domain
e4apkA1 A:3001-3143,A:3403-3537 GroEL equatorial domain-like GroEL equatorial domain-like GroEL equatorial domain-like
e4apkA2 A:3145-3210,A:3367-3402 Zincin-like GroEL-intermediate domain like GroEL-intermediate domain like
e4apkA3 A:3211-3366 The "swivelling" beta/beta/alpha domains The "swivelling" beta/beta/alpha domain The "swivelling" beta/beta/alpha domain
e4apkb1 b:4001-4139,b:4389-4515 GroEL equatorial domain-like GroEL equatorial domain-like GroEL equatorial domain-like
e4apkb2 b:4140-4204,b:4353-4388 Zincin-like GroEL-intermediate domain like GroEL-intermediate domain like
e4apkb3 b:4205-4352 The "swivelling" beta/beta/alpha domains The "swivelling" beta/beta/alpha domain The "swivelling" beta/beta/alpha domain
e4apkB1 B:3001-3139,B:3389-3515 GroEL equatorial domain-like GroEL equatorial domain-like GroEL equatorial domain-like
e4apkB2 B:3140-3204,B:3353-3388 Zincin-like GroEL-intermediate domain like GroEL-intermediate domain like
e4apkB3 B:3205-3352 The "swivelling" beta/beta/alpha domains The "swivelling" beta/beta/alpha domain The "swivelling" beta/beta/alpha domain
e4apkd6 d:4008-4141,d:4409-4528 GroEL equatorial domain-like GroEL equatorial domain-like GroEL equatorial domain-like
e4apkd5 d:4142-4210,d:4370-4408 Zincin-like GroEL-intermediate domain like GroEL-intermediate domain like
e4apkd4 d:4211-4369 The "swivelling" beta/beta/alpha domains The "swivelling" beta/beta/alpha domain The "swivelling" beta/beta/alpha domain
e4apkD6 D:3008-3141,D:3409-3528 GroEL equatorial domain-like GroEL equatorial domain-like GroEL equatorial domain-like
e4apkD5 D:3142-3210,D:3370-3408 Zincin-like GroEL-intermediate domain like GroEL-intermediate domain like
e4apkD4 D:3211-3369 The "swivelling" beta/beta/alpha domains The "swivelling" beta/beta/alpha domain The "swivelling" beta/beta/alpha domain
e4apke8 e:4033-4162,e:4438-4560 GroEL equatorial domain-like GroEL equatorial domain-like GroEL equatorial domain-like
e4apke9 e:4163-4240,e:4402-4437 Zincin-like GroEL-intermediate domain like GroEL-intermediate domain like
e4apke7 e:4241-4401 The "swivelling" beta/beta/alpha domains The "swivelling" beta/beta/alpha domain The "swivelling" beta/beta/alpha domain
e4apkE8 E:3033-3162,E:3438-3560 GroEL equatorial domain-like GroEL equatorial domain-like GroEL equatorial domain-like
e4apkE9 E:3163-3240,E:3402-3437 Zincin-like GroEL-intermediate domain like GroEL-intermediate domain like
e4apkE7 E:3241-3401 The "swivelling" beta/beta/alpha domains The "swivelling" beta/beta/alpha domain The "swivelling" beta/beta/alpha domain
e4apkg12 g:4013-4142,g:4937-4474 GroEL equatorial domain-like GroEL equatorial domain-like GroEL equatorial domain-like
e4apkg11 g:4143-4220,g:4901-4936 Zincin-like GroEL-intermediate domain like GroEL-intermediate domain like
e4apkg10 g:4221-4374 The "swivelling" beta/beta/alpha domains The "swivelling" beta/beta/alpha domain The "swivelling" beta/beta/alpha domain
e4apkG12 G:3013-3142,G:3937-3474 GroEL equatorial domain-like GroEL equatorial domain-like GroEL equatorial domain-like
e4apkG11 G:3143-3220,G:3901-3936 Zincin-like GroEL-intermediate domain like GroEL-intermediate domain like
e4apkG10 G:3221-3374 The "swivelling" beta/beta/alpha domains The "swivelling" beta/beta/alpha domain The "swivelling" beta/beta/alpha domain
e4apkh9 h:4010-4146,h:4408-4528 GroEL equatorial domain-like GroEL equatorial domain-like GroEL equatorial domain-like
e4apkh8 h:4147-4215,h:4372-4407 Zincin-like GroEL-intermediate domain like GroEL-intermediate domain like
e4apkh7 h:4216-4371 The "swivelling" beta/beta/alpha domains The "swivelling" beta/beta/alpha domain The "swivelling" beta/beta/alpha domain
e4apkH9 H:3010-3146,H:3408-3528 GroEL equatorial domain-like GroEL equatorial domain-like GroEL equatorial domain-like
e4apkH8 H:3147-3215,H:3372-3407 Zincin-like GroEL-intermediate domain like GroEL-intermediate domain like
e4apkH7 H:3216-3371 The "swivelling" beta/beta/alpha domains The "swivelling" beta/beta/alpha domain The "swivelling" beta/beta/alpha domain
e4apkq1 q:4001-4142,q:4404-4523 GroEL equatorial domain-like GroEL equatorial domain-like GroEL equatorial domain-like
e4apkq2 q:4143-4209,q:4366-4403 Zincin-like GroEL-intermediate domain like GroEL-intermediate domain like
e4apkq3 q:4210-4365 The "swivelling" beta/beta/alpha domains The "swivelling" beta/beta/alpha domain The "swivelling" beta/beta/alpha domain
e4apkQ1 Q:3001-3142,Q:3404-3523 GroEL equatorial domain-like GroEL equatorial domain-like GroEL equatorial domain-like
e4apkQ2 Q:3143-3209,Q:3366-3403 Zincin-like GroEL-intermediate domain like GroEL-intermediate domain like
e4apkQ3 Q:3210-3365 The "swivelling" beta/beta/alpha domains The "swivelling" beta/beta/alpha domain The "swivelling" beta/beta/alpha domain
e4apkz1 z:4001-4136,z:4392-4531 GroEL equatorial domain-like GroEL equatorial domain-like GroEL equatorial domain-like
e4apkz3 z:4199-4354 The "swivelling" beta/beta/alpha domains The "swivelling" beta/beta/alpha domain The "swivelling" beta/beta/alpha domain
e4apkZ1 Z:3001-3136,Z:3392-3531 GroEL equatorial domain-like GroEL equatorial domain-like GroEL equatorial domain-like
e4apkZ3 Z:3199-3354 The "swivelling" beta/beta/alpha domains The "swivelling" beta/beta/alpha domain The "swivelling" beta/beta/alpha domain

Structural contacts of domain e4apkA2 of H-group "GroEL-intermediate domain like":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e4apkG11 A:X,Y,Z->G:x,y,z GroEL-intermediate domain like Interaction Interface Pymol
e4apkG12 A:X,Y,Z->G:x,y,z GroEL equatorial domain-like Interaction Interface Pymol
e4apkD4 A:X,Y,Z->D:x,y,z The "swivelling" beta/beta/alpha domain Interaction Interface Pymol
e4apkd5 A:X-1,Y,Z->d:x,y,z GroEL-intermediate domain like Interaction Interface Pymol