ECOD: domain e4awjD2

Domain ID e4awjD2

A: a+b two layers
X: beta-Grasp
H: Ubiquitin-related
T: Ubiquitin-like
F: ubiquitin

UID:	001210487
Type:	Automatic domain
Parent:	e2zeqA1
Range:	D:1-101
PDB:	4awj
PDB Description:	TRANSCRIPTION ELONGATION FACTOR B POLYPEPTIDE 2
UniProt:	Q15370
Hsap BLAST neighbor:	Q15370
Species:	Homo sapiens

Domain
In chain context
In PDB context

Structure of domain e4awjD2

Domains in the same chain:

Download Pymol

e4awjD2	D:1-101	beta-Grasp	Ubiquitin-related	Ubiquitin-like

Domains in the same PDB:

e4awjA2	A:1-103	beta-Grasp	Ubiquitin-related	Ubiquitin-like
e4awjB2	B:17-112	POZ domain	POZ domain	POZ domain
e4awjC3	C:62-154	Immunoglobulin-like beta-sandwich	Immunoglobulin-related	Prealbumin-like
e4awjC4	C:155-200	SOCS box-like	SOCS box-like	SOCS box-like
e4awjD2	D:1-101	beta-Grasp	Ubiquitin-related	Ubiquitin-like
e4awjE2	E:17-112	POZ domain	POZ domain	POZ domain
e4awjF4	F:63-154	Immunoglobulin-like beta-sandwich	Immunoglobulin-related	Prealbumin-like
e4awjF3	F:155-204	SOCS box-like	SOCS box-like	SOCS box-like
e4awjG2	G:1-103	beta-Grasp	Ubiquitin-related	Ubiquitin-like
e4awjH2	H:17-112	POZ domain	POZ domain	POZ domain
e4awjI4	I:62-154	Immunoglobulin-like beta-sandwich	Immunoglobulin-related	Prealbumin-like
e4awjI3	I:155-205	SOCS box-like	SOCS box-like	SOCS box-like
e4awjJ2	J:1-103	beta-Grasp	Ubiquitin-related	Ubiquitin-like
e4awjK2	K:16-112	POZ domain	POZ domain	POZ domain
e4awjL4	L:62-154	Immunoglobulin-like beta-sandwich	Immunoglobulin-related	Prealbumin-like
e4awjL3	L:155-205	SOCS box-like	SOCS box-like	SOCS box-like

Structural contacts of domain e4awjD2 of H-group "Ubiquitin-related":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e4awjE2	D:X,Y,Z->E:x,y,z	POZ domain	Interaction Interface Pymol
e4awjJ2	D:-Y,-X+1,-Z+1/4->J:x,y,z	Ubiquitin-related	Interaction Interface Pymol
e4awjF3	D:X,Y,Z->F:x,y,z	SOCS box-like	Interaction Interface Pymol