Domain ID e4b17A1

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  • A: a/b three-layered sandwiches
  • X: Rossmann-like
  • H: Rossmann-related
  • T: S-adenosyl-L-methionine-dependent methyltransferases
  • F: FtsJ
UID: 000991578
Type: Automatic domain
Parent: e2p41A1
Range: A:118-121,A:179-357
Ligands: EDO GOL SAM SO4
PDB: 4b17
PDB Description: RIBOSOMAL RNA LARGE SUBUNIT METHYLTRANSFERASE M
UniProt: P0ADR6
Species:

Structure of domain e4b17A1

Structural contacts of domain e4b17A1 of H-group "Rossmann-related":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e4b17A2 A:x,y,z->A:Y,X,-Z+2 Ferredoxin-like domain in ThiI Interaction Interface Pymol
e4b17A1 A:x,y,z->A:Y,X,-Z+2 Rossmann-related Interaction Interface Pymol
e4b17A3 A:x,y,z->A:Y,X,-Z+2 THUMP domain-like Interaction Interface Pymol
e4b17A2 A:Y,X,-Z+2->A:x,y,z Ferredoxin-like domain in ThiI Interaction Interface Pymol
e4b17A1 A:Y,X,-Z+2->A:x,y,z Rossmann-related Interaction Interface Pymol
e4b17A3 A:Y,X,-Z+2->A:x,y,z THUMP domain-like Interaction Interface Pymol
e4b17A2 A:-Y+2,X-Y+1,Z+1/3->A:x,y,z Ferredoxin-like domain in ThiI Interaction Interface Pymol
e4b17A1 A:x,y,z->A:-X+1,-X+Y,-Z+7/3 Rossmann-related Interaction Interface Pymol
e4b17A3 A:-X+1,-X+Y,-Z+7/3->A:x,y,z THUMP domain-like Interaction Interface Pymol
e4b17A1 A:-X+1,-X+Y,-Z+7/3->A:x,y,z Rossmann-related Interaction Interface Pymol
e4b17A1 A:x,y,z->A:X-Y+1,-Y+2,-Z+8/3 Rossmann-related Interaction Interface Pymol
e4b17A1 A:X-Y+1,-Y+2,-Z+8/3->A:x,y,z Rossmann-related Interaction Interface Pymol