Domain ID e4b2yD2

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  • A: alpha bundles
  • X: Second alpha-helical domain in heme-dependent catalases
  • H: Second alpha-helical domain in heme-dependent catalases
  • T: Second alpha-helical domain in heme-dependent catalases
  • F: Catalase-rel
UID: 001592491
Type: Automatic domain
Parent: e1p80A3
Range: D:457-550
PDB: 4b2y
PDB Description: CATALASE-PHENOL OXIDASE
UniProt: R4GRT6
Species: Scytalidium thermophilum

Structure of domain e4b2yD2

Domains in the same chain:

e4b2yD4 D:21-157,D:218-456 Barrel domain in heme-dependent catalases Barrel domain in heme-dependent catalases Barrel domain in heme-dependent catalases
e4b2yD1 D:158-217 First alpha-helical domain in heme-dependent catalases First alpha-helical domain in heme-dependent catalases First alpha-helical domain in heme-dependent catalases
e4b2yD2 D:457-550 Second alpha-helical domain in heme-dependent catalases Second alpha-helical domain in heme-dependent catalases Second alpha-helical domain in heme-dependent catalases
e4b2yD3 D:551-698 Flavodoxin-like Class I glutamine amidotransferase-like Class I glutamine amidotransferase-like

Domains in the same PDB:

e4b2yA2 A:21-157,A:218-456 Barrel domain in heme-dependent catalases Barrel domain in heme-dependent catalases Barrel domain in heme-dependent catalases
e4b2yA3 A:158-217 First alpha-helical domain in heme-dependent catalases First alpha-helical domain in heme-dependent catalases First alpha-helical domain in heme-dependent catalases
e4b2yA4 A:457-550 Second alpha-helical domain in heme-dependent catalases Second alpha-helical domain in heme-dependent catalases Second alpha-helical domain in heme-dependent catalases
e4b2yA1 A:551-698 Flavodoxin-like Class I glutamine amidotransferase-like Class I glutamine amidotransferase-like
e4b2yB2 B:22-157,B:218-456 Barrel domain in heme-dependent catalases Barrel domain in heme-dependent catalases Barrel domain in heme-dependent catalases
e4b2yB1 B:158-217 First alpha-helical domain in heme-dependent catalases First alpha-helical domain in heme-dependent catalases First alpha-helical domain in heme-dependent catalases
e4b2yB3 B:457-544 Second alpha-helical domain in heme-dependent catalases Second alpha-helical domain in heme-dependent catalases Second alpha-helical domain in heme-dependent catalases
e4b2yB6 B:545-698 Flavodoxin-like Class I glutamine amidotransferase-like Class I glutamine amidotransferase-like
e4b2yC4 C:21-157,C:218-456 Barrel domain in heme-dependent catalases Barrel domain in heme-dependent catalases Barrel domain in heme-dependent catalases
e4b2yC3 C:158-217 First alpha-helical domain in heme-dependent catalases First alpha-helical domain in heme-dependent catalases First alpha-helical domain in heme-dependent catalases
e4b2yC1 C:457-550 Second alpha-helical domain in heme-dependent catalases Second alpha-helical domain in heme-dependent catalases Second alpha-helical domain in heme-dependent catalases
e4b2yC2 C:551-698 Flavodoxin-like Class I glutamine amidotransferase-like Class I glutamine amidotransferase-like
e4b2yD4 D:21-157,D:218-456 Barrel domain in heme-dependent catalases Barrel domain in heme-dependent catalases Barrel domain in heme-dependent catalases
e4b2yD1 D:158-217 First alpha-helical domain in heme-dependent catalases First alpha-helical domain in heme-dependent catalases First alpha-helical domain in heme-dependent catalases
e4b2yD2 D:457-550 Second alpha-helical domain in heme-dependent catalases Second alpha-helical domain in heme-dependent catalases Second alpha-helical domain in heme-dependent catalases
e4b2yD3 D:551-698 Flavodoxin-like Class I glutamine amidotransferase-like Class I glutamine amidotransferase-like

Structural contacts of domain e4b2yD2 of H-group "Second alpha-helical domain in heme-dependent catalases":

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The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e4b2yB6 D:x,y,z->B:X,Y,Z Class I glutamine amidotransferase-like Interaction Interface Pymol
e4b2yA1 D:X-1/2,Y-1/2,Z->A:x,y,z Class I glutamine amidotransferase-like Interaction Interface Pymol
e4b2yB2 D:-X+1/2,Y-1/2,-Z-1->B:x,y,z Barrel domain in heme-dependent catalases Interaction Interface Pymol