Domain ID e4b3pB1

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  • A: alpha bundles
  • X: helical bundle domain in reverse transcriptase-like polymerases
  • H: helical bundle domain in reverse transcriptase-like polymerases
  • T: helical bundle domain in reverse transcriptase-like polymerases
  • F: RVT_thumb
UID: 001168460
Type: Automatic domain
Parent: e2zd1B1
Range: B:231-304
PDB: 4b3p
PDB Description: P51 RT
UniProt: P04585
Species: Human immunodeficiency virus 1

Structure of domain e4b3pB1

Domains in the same chain:

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e4b3pB6 B:7-230 Alpha-beta plaits Adenylyl and guanylyl cyclase catalytic domain-like Adenylyl and guanylyl cyclase catalytic domain-like
e4b3pB1 B:231-304 helical bundle domain in reverse transcriptase-like polymerases helical bundle domain in reverse transcriptase-like polymerases helical bundle domain in reverse transcriptase-like polymerases
e4b3pB2 B:305-431 Ribonuclease H-like RNaseH-like domain in reverse transcriptase RNaseH-like domain in reverse transcriptase

Domains in the same PDB:

e4b3pA1 A:5-242 Alpha-beta plaits Adenylyl and guanylyl cyclase catalytic domain-like Adenylyl and guanylyl cyclase catalytic domain-like
e4b3pA4 A:243-316 helical bundle domain in reverse transcriptase-like polymerases helical bundle domain in reverse transcriptase-like polymerases helical bundle domain in reverse transcriptase-like polymerases
e4b3pA2 A:317-428 Ribonuclease H-like RNaseH-like domain in reverse transcriptase RNaseH-like domain in reverse transcriptase
e4b3pA3 A:429-556 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e4b3pB6 B:7-230 Alpha-beta plaits Adenylyl and guanylyl cyclase catalytic domain-like Adenylyl and guanylyl cyclase catalytic domain-like
e4b3pB1 B:231-304 helical bundle domain in reverse transcriptase-like polymerases helical bundle domain in reverse transcriptase-like polymerases helical bundle domain in reverse transcriptase-like polymerases
e4b3pB2 B:305-431 Ribonuclease H-like RNaseH-like domain in reverse transcriptase RNaseH-like domain in reverse transcriptase

Structural contacts of domain e4b3pB1 of H-group "helical bundle domain in reverse transcriptase-like polymerases":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e4b3pA3 B:x,y,z->A:X,Y,Z Ribonuclease H-like Interaction Interface Pymol
e4b3pB2 B:x,y,z->B:Y,X,-Z+1/3 RNaseH-like domain in reverse transcriptase Interaction Interface Pymol
e4b3pB1 B:x,y,z->B:Y,X,-Z+1/3 helical bundle domain in reverse transcriptase-like polymerases Interaction Interface Pymol
e4b3pB2 B:Y,X,-Z+1/3->B:x,y,z RNaseH-like domain in reverse transcriptase Interaction Interface Pymol
e4b3pB1 B:Y,X,-Z+1/3->B:x,y,z helical bundle domain in reverse transcriptase-like polymerases Interaction Interface Pymol