ECOD: domain e4b3xA1

Domain ID e4b3xA1

A: a/b three-layered sandwiches
X: P-loop domains-like
H: P-loop domains-related
T: P-loop containing nucleoside triphosphate hydrolases
F: GTP_EFTU

UID:	001390526
Type:	Automatic domain
Parent:	e2c78A3
Range:	A:68-243
Ligands:	GOL
PDB:	4b3x
PDB Description:	TRANSLATION INITIATION FACTOR IF-2
UniProt:	P48515
Hsap BLAST neighbor:	P46199
Species:

Domain
In chain context
In PDB context

Structure of domain e4b3xA1

Domains in the same chain:

Download Pymol

e4b3xA3	A:1-67	HTH	HTH	Putative DNA-binding domain
e4b3xA1	A:68-243	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e4b3xA2	A:244-363	cradle loop barrel	RIFT-related	Alanine racemase-C

Domains in the same PDB:

e4b3xA3	A:1-67	HTH	HTH	Putative DNA-binding domain
e4b3xA1	A:68-243	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e4b3xA2	A:244-363	cradle loop barrel	RIFT-related	Alanine racemase-C

Structural contacts of domain e4b3xA1 of H-group "P-loop domains-related":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e4b3xA1	A:x,y,z->A:-X+1,Y-1/2,-Z+1/2	P-loop domains-related	Interaction Interface Pymol
e4b3xA2	A:-X+1,Y-1/2,-Z+1/2->A:x,y,z	RIFT-related	Interaction Interface Pymol
e4b3xA1	A:-X+1,Y-1/2,-Z+1/2->A:x,y,z	P-loop domains-related	Interaction Interface Pymol
e4b3xA3	A:x,y,z->A:X-1/2,-Y+3/2,-Z	HTH	Interaction Interface Pymol
e4b3xA2	A:x,y,z->A:X-1,Y,Z	RIFT-related	Interaction Interface Pymol
e4b3xA1	A:x,y,z->A:X-1,Y,Z	P-loop domains-related	Interaction Interface Pymol
e4b3xA1	A:X-1,Y,Z->A:x,y,z	P-loop domains-related	Interaction Interface Pymol
e4b3xA2	A:-X+2,Y-1/2,-Z+1/2->A:x,y,z	RIFT-related	Interaction Interface Pymol