ECOD: domain e4b48A5

Domain ID e4b48A5

A: beta barrels
X: cradle loop barrel
H: RIFT-related
T: Alanine racemase-C
F: EF-G_D2

UID:	001166751
Type:	Automatic domain
Parent:	e2dy1A1
Range:	A:244-354
PDB:	4b48
PDB Description:	TRANSLATION INITIATION FACTOR IF-2
UniProt:	P48515
Hsap BLAST neighbor:	P46199
Species:

Domain
In chain context
In PDB context

Structure of domain e4b48A5

Domains in the same chain:

Download Pymol

e4b48A6	A:1-67	HTH	HTH	Putative DNA-binding domain
e4b48A4	A:68-243	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e4b48A5	A:244-354	cradle loop barrel	RIFT-related	Alanine racemase-C

Domains in the same PDB:

e4b48A6	A:1-67	HTH	HTH	Putative DNA-binding domain
e4b48A4	A:68-243	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e4b48A5	A:244-354	cradle loop barrel	RIFT-related	Alanine racemase-C

Structural contacts of domain e4b48A5 of H-group "RIFT-related":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e4b48A4	A:x,y,z->A:-X+1,Y-1/2,-Z+1/2	P-loop domains-related	Interaction Interface Pymol
e4b48A6	A:x,y,z->A:X-1/2,-Y+3/2,-Z	HTH	Interaction Interface Pymol
e4b48A6	A:X-1/2,-Y+3/2,-Z->A:x,y,z	HTH	Interaction Interface Pymol
e4b48A4	A:X-1,Y,Z->A:x,y,z	P-loop domains-related	Interaction Interface Pymol
e4b48A6	A:x,y,z->A:X,Y-1,Z	HTH	Interaction Interface Pymol
e4b48A5	A:x,y,z->A:X-1/2,-Y+1/2,-Z	RIFT-related	Interaction Interface Pymol
e4b48A5	A:X-1/2,-Y+1/2,-Z->A:x,y,z	RIFT-related	Interaction Interface Pymol