ECOD: domain e4b9kD2

Domain ID e4b9kD2

A: a+b two layers
X: beta-Grasp
H: Ubiquitin-related
T: Ubiquitin-like
F: ubiquitin

UID:	001210492
Type:	Automatic domain
Parent:	e2zeqA1
Range:	D:1-103
PDB:	4b9k
PDB Description:	TRANSCRIPTION ELONGATION FACTOR B POLYPEPTIDE 2
UniProt:	Q15370
Hsap BLAST neighbor:	Q15370
Species:	Homo sapiens

Domain
In chain context
In PDB context

Structure of domain e4b9kD2

Domains in the same chain:

Download Pymol

e4b9kD2	D:1-103	beta-Grasp	Ubiquitin-related	Ubiquitin-like

Domains in the same PDB:

e4b9kA1	A:1-104	beta-Grasp	Ubiquitin-related	Ubiquitin-like
e4b9kB2	B:16-112	POZ domain	POZ domain	POZ domain
e4b9kC1	C:60-154	Immunoglobulin-like beta-sandwich	Immunoglobulin-related	Prealbumin-like
e4b9kC2	C:154-204	SOCS box-like	SOCS box-like	SOCS box-like
e4b9kD2	D:1-103	beta-Grasp	Ubiquitin-related	Ubiquitin-like
e4b9kE2	E:17-112	POZ domain	POZ domain	POZ domain
e4b9kF4	F:62-154	Immunoglobulin-like beta-sandwich	Immunoglobulin-related	Prealbumin-like
e4b9kF3	F:155-204	SOCS box-like	SOCS box-like	SOCS box-like
e4b9kG2	G:1-103	beta-Grasp	Ubiquitin-related	Ubiquitin-like
e4b9kH2	H:17-112	POZ domain	POZ domain	POZ domain
e4b9kI4	I:62-154	Immunoglobulin-like beta-sandwich	Immunoglobulin-related	Prealbumin-like
e4b9kI3	I:155-208	SOCS box-like	SOCS box-like	SOCS box-like
e4b9kJ2	J:1-103	beta-Grasp	Ubiquitin-related	Ubiquitin-like
e4b9kK2	K:16-112	POZ domain	POZ domain	POZ domain
e4b9kL4	L:62-154	Immunoglobulin-like beta-sandwich	Immunoglobulin-related	Prealbumin-like
e4b9kL3	L:155-207	SOCS box-like	SOCS box-like	SOCS box-like

Structural contacts of domain e4b9kD2 of H-group "Ubiquitin-related":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e4b9kE2	D:X,Y,Z->E:x,y,z	POZ domain	Interaction Interface Pymol
e4b9kJ2	D:-Y,-X+1,-Z+1/4->J:x,y,z	Ubiquitin-related	Interaction Interface Pymol
e4b9kF3	D:X,Y,Z->F:x,y,z	SOCS box-like	Interaction Interface Pymol