Domain ID e4bdmD1

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  • A: a/b three-layered sandwiches
  • X: Periplasmic binding protein-like II
  • H: Periplasmic binding protein-like II
  • T: Periplasmic binding protein-like II
  • F: Lig_chan-Glu_bd
UID: 001519680
Type: Automatic domain
Parent: e1mqiA3
Range: D:432-535,D:763-799
Ligands: KAI
PDB: 4bdm
PDB Description: GLUTAMATE RECEPTOR, IONOTROPIC KAINATE 2
UniProt: P42260
Hsap BLAST neighbor: Q13002
Species: Rattus norvegicus

Structure of domain e4bdmD1

Structural contacts of domain e4bdmD1 of H-group "Periplasmic binding protein-like II":

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The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e1mqiA3 D:x,y,z->C:X,Y,Z Periplasmic binding protein-like II Interaction Interface Pymol
e4bdmC2 D:x,y,z->C:X,Y,Z Periplasmic binding protein-like II Interaction Interface Pymol
e4bdmA1 D:x,y,z->A:X,Y,Z Periplasmic binding protein-like II Interaction Interface Pymol
e4bdmA1 D:X-1,Y,Z->A:x,y,z Periplasmic binding protein-like II Interaction Interface Pymol
e4bdmA1 D:X-1/2,-Y-1/2,-Z->B:x,y,z Periplasmic binding protein-like II Interaction Interface Pymol
e4bdmA1 D:x,y,z->B:X,Y,Z Periplasmic binding protein-like II Interaction Interface Pymol
e4bdmC2 D:-X+3/2,-Y,Z-1/2->C:x,y,z Periplasmic binding protein-like II Interaction Interface Pymol