Domain ID e4bdoA1

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  • A: a/b three-layered sandwiches
  • X: Periplasmic binding protein-like II
  • H: Periplasmic binding protein-like II
  • T: Periplasmic binding protein-like II
  • F: Lig_chan-Glu_bd
UID: 001519690
Type: Automatic domain
Parent: e1mqiA3
Range: A:431-535,A:763-800
Ligands: GLU KAI NA
PDB: 4bdo
PDB Description: GLUTAMATE RECEPTOR, IONOTROPIC KAINATE 2
UniProt: P42260
Hsap BLAST neighbor: Q13002
Species: Rattus norvegicus

Structure of domain e4bdoA1

Structural contacts of domain e4bdoA1 of H-group "Periplasmic binding protein-like II":

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The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e4bdoB2 A:X,Y,Z->B:x,y,z Periplasmic binding protein-like II Interaction Interface Pymol
e4bdoB2 A:X,Y,Z->B:x,y,z Periplasmic binding protein-like II Interaction Interface Pymol
e4bdoC2 A:X,Y,Z->C:x,y,z Periplasmic binding protein-like II Interaction Interface Pymol
e4bdoC2 A:x,y,z->D:X-1/2,-Y+1/2,-Z Periplasmic binding protein-like II Interaction Interface Pymol
e4bdoC2 A:X,Y,Z->D:x,y,z Periplasmic binding protein-like II Interaction Interface Pymol