Domain ID e4bdrA2

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  • A: a/b three-layered sandwiches
  • X: Periplasmic binding protein-like II
  • H: Periplasmic binding protein-like II
  • T: Periplasmic binding protein-like II
  • F: Lig_chan-Glu_bd
UID: 001519703
Type: Automatic domain
Parent: e1mqiA3
Range: A:432-535,A:763-804
Ligands: CL KAI NA
PDB: 4bdr
PDB Description: GLUTAMATE RECEPTOR, IONOTROPIC KAINATE 2
UniProt: P42260
Hsap BLAST neighbor: Q13002
Species: Rattus norvegicus

Structure of domain e4bdrA2

Structural contacts of domain e4bdrA2 of H-group "Periplasmic binding protein-like II":

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The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e1mqiA3 A:X,Y,Z->B:x,y,z Periplasmic binding protein-like II Interaction Interface Pymol
e4bdrB2 A:X,Y,Z->B:x,y,z Periplasmic binding protein-like II Interaction Interface Pymol
e4bdrB2 A:x,y,z->B:-X-1/2,Y-1/2,-Z+1/2 Periplasmic binding protein-like II Interaction Interface Pymol
e4bdrA2 A:x,y,z->A:X,-Y+1,-Z Periplasmic binding protein-like II Interaction Interface Pymol
e4bdrA2 A:X,-Y+1,-Z->A:x,y,z Periplasmic binding protein-like II Interaction Interface Pymol
e4bdrA2 A:x,y,z->B:X-1/2,-Y+1/2,-Z+1/2 Periplasmic binding protein-like II Interaction Interface Pymol
e4bdrA2 A:x,y,z->A:-X-1,Y,-Z Periplasmic binding protein-like II Interaction Interface Pymol
e4bdrA2 A:-X-1,Y,-Z->A:x,y,z Periplasmic binding protein-like II Interaction Interface Pymol
e4bdrA2 A:x,y,z->B:-X-1/2,-Y+1/2,Z-1/2 Periplasmic binding protein-like II Interaction Interface Pymol
e4bdrB2 A:X,-Y+1,-Z->B:x,y,z Periplasmic binding protein-like II Interaction Interface Pymol