Domain ID e4bebA1

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  • A: a/b three-layered sandwiches
  • X: P-loop domains-like
  • H: P-loop domains-related
  • T: P-loop containing nucleoside triphosphate hydrolases
  • F: UvrB_D3-like
UID: 001309436
Type: Automatic domain
Parent: e2w00A3
Range: A:456-711
Ligands: ATP
PDB: 4beb
PDB Description: TYPE I RESTRICTION ENZYME HSDR
UniProt: P10486
Species: Escherichia coli

Structure of domain e4bebA1

Domains in the same chain:

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e4bebA2 A:13-246 Restriction endonuclease-like Restriction endonuclease-like Restriction endonuclease-like
e4bebA3 A:247-455 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e4bebA1 A:456-711 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e4bebA4 A:712-884 HSDR subunit helical domain HSDR subunit helical domain HSDR subunit helical domain

Domains in the same PDB:

e4bebA2 A:13-246 Restriction endonuclease-like Restriction endonuclease-like Restriction endonuclease-like
e4bebA3 A:247-455 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e4bebA1 A:456-711 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e4bebA4 A:712-884 HSDR subunit helical domain HSDR subunit helical domain HSDR subunit helical domain
e4bebB2 B:13-246 Restriction endonuclease-like Restriction endonuclease-like Restriction endonuclease-like
e4bebB3 B:247-455 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e4bebB1 B:456-711 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e4bebB4 B:712-884 HSDR subunit helical domain HSDR subunit helical domain HSDR subunit helical domain
e4bebC2 C:13-246 Restriction endonuclease-like Restriction endonuclease-like Restriction endonuclease-like
e4bebC3 C:247-455 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e4bebC1 C:456-711 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e4bebC4 C:712-884 HSDR subunit helical domain HSDR subunit helical domain HSDR subunit helical domain
e4bebD2 D:13-246 Restriction endonuclease-like Restriction endonuclease-like Restriction endonuclease-like
e4bebD3 D:247-455 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e4bebD1 D:456-711 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e4bebD4 D:712-884 HSDR subunit helical domain HSDR subunit helical domain HSDR subunit helical domain

Structural contacts of domain e4bebA1 of H-group "P-loop domains-related":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e4bebA2 A:x,y,z->A:-X+1,Y-1/2,-Z+2 Restriction endonuclease-like Interaction Interface Pymol
e4bebC2 A:X,Y,Z->C:x,y,z Restriction endonuclease-like Interaction Interface Pymol
e4bebC2 A:x,y,z->C:-X,Y-1/2,-Z+2 Restriction endonuclease-like Interaction Interface Pymol
e4bebC1 A:x,y,z->C:X,Y-1,Z P-loop domains-related Interaction Interface Pymol
e4bebB3 A:X,Y,Z-1->B:x,y,z P-loop domains-related Interaction Interface Pymol